Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 AL022328.1-201ENST00000610050 478 ntBASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 PRORSD1P-202ENST00000563365 2154 ntBASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OTOP1Q7RTM1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 GGT3P-204ENST00000453783 1664 ntBASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 MIR5189-201ENST00000577370 114 ntBASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 AC026979.3-201ENST00000607315 403 ntBASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 AC020765.3-201ENST00000613051 740 ntBASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
OTOP1Q7RTM1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 RPL7P3-201ENST00000441388 714 ntBASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 TIMM17BP1-201ENST00000545713 516 ntBASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.59■□□□□ 0.57
OTOP1Q7RTM1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms