Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 SDHAP3-202ENST00000515467 728 ntBASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 AL109936.8-201ENST00000641772 604 ntBASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.96■□□□□ 0.46
SWSAP1Q6NVH7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SWSAP1Q6NVH7 PCDH8P1-201ENST00000428983 2773 ntBASIC17.96■□□□□ 0.46
SWSAP1Q6NVH7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.96■□□□□ 0.46
SWSAP1Q6NVH7 BNIP3P1-202ENST00000550043 1585 ntBASIC17.96■□□□□ 0.46
SWSAP1Q6NVH7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 PIN1P1-201ENST00000412108 996 ntBASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SWSAP1Q6NVH7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 AC114501.2-201ENST00000439631 535 ntBASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 SPDYE18-201ENST00000510091 1050 ntBASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 AC104794.3-201ENST00000566840 1248 ntBASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.94■□□□□ 0.46
SWSAP1Q6NVH7 AC004461.2-201ENST00000629517 803 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms