Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 FAM58CP-201ENST00000435741 640 ntBASIC16.79■□□□□ 0.28
LRRC38Q5VT99 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 AC243562.1-201ENST00000560672 389 ntBASIC16.79■□□□□ 0.28
LRRC38Q5VT99 AC040169.1-201ENST00000565382 521 ntBASIC16.79■□□□□ 0.28
LRRC38Q5VT99 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 ACTG1P14-201ENST00000446382 1122 ntBASIC16.78■□□□□ 0.28
LRRC38Q5VT99 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 KRT8P23-201ENST00000560090 1207 ntBASIC16.78■□□□□ 0.28
LRRC38Q5VT99 LINC01225-203ENST00000563550 1244 ntBASIC16.78■□□□□ 0.28
LRRC38Q5VT99 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.78■□□□□ 0.28
LRRC38Q5VT99 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC38Q5VT99 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 AC004987.2-201ENST00000395959 1148 ntBASIC16.77■□□□□ 0.28
LRRC38Q5VT99 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 AC023274.1-201ENST00000418278 595 ntBASIC16.77■□□□□ 0.28
LRRC38Q5VT99 AC026396.1-201ENST00000419388 421 ntBASIC16.77■□□□□ 0.28
LRRC38Q5VT99 RPS8P6-201ENST00000426177 609 ntBASIC16.77■□□□□ 0.28
LRRC38Q5VT99 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRC38Q5VT99 AC084121.4-201ENST00000641598 221 ntBASIC16.77■□□□□ 0.28
LRRC38Q5VT99 AF228730.8-201ENST00000642140 221 ntBASIC16.77■□□□□ 0.28
LRRC38Q5VT99 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.77■□□□□ 0.27
LRRC38Q5VT99 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms