Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 SIGLEC16-201ENST00000599858 1437 ntBASIC12.96□□□□□ -0.34
FAM78BQ5VT40 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 AC023157.3-201ENST00000619086 2088 ntBASIC12.95□□□□□ -0.34
FAM78BQ5VT40 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 AL590787.1-201ENST00000568856 1315 ntBASIC12.95□□□□□ -0.34
FAM78BQ5VT40 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.95□□□□□ -0.34
FAM78BQ5VT40 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 IGHV3-47-201ENST00000425060 335 ntBASIC12.95□□□□□ -0.34
FAM78BQ5VT40 ATP5G2P1-201ENST00000433580 426 ntBASIC12.95□□□□□ -0.34
FAM78BQ5VT40 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 AC012615.1-201ENST00000565797 1299 ntBASIC12.95□□□□□ -0.34
FAM78BQ5VT40 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 BNIP3P18-201ENST00000593976 575 ntBASIC12.95□□□□□ -0.34
FAM78BQ5VT40 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 AP003680.1-201ENST00000598970 3660 ntBASIC12.95□□□□□ -0.34
FAM78BQ5VT40 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 AC112504.1-201ENST00000623415 1841 ntBASIC12.95□□□□□ -0.34
FAM78BQ5VT40 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FAM78BQ5VT40 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 RCN1P2-201ENST00000398357 915 ntBASIC12.94□□□□□ -0.34
FAM78BQ5VT40 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 AC099336.1-202ENST00000602961 463 ntBASIC12.94□□□□□ -0.34
FAM78BQ5VT40 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
FAM78BQ5VT40 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms