Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 HAUS4P1-201ENST00000406739 1145 ntBASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 ELK2BP-201ENST00000415014 1224 ntBASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 AC069148.1-201ENST00000608741 768 ntBASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 GGTLC5P-201ENST00000617623 998 ntBASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00242Q5T6M2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms