Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AL590640.2-201ENST00000457038 527 ntBASIC13.82□□□□□ -0.2
LRRK2Q5S007 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AC013467.2-201ENST00000605472 835 ntBASIC13.82□□□□□ -0.2
LRRK2Q5S007 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 ABALON-201ENST00000629058 1903 ntBASIC13.82□□□□□ -0.2
LRRK2Q5S007 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AC009113.1-201ENST00000570267 2443 ntBASIC13.82□□□□□ -0.2
LRRK2Q5S007 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AC008132.1-202ENST00000342005 1389 ntBASIC13.82□□□□□ -0.2
LRRK2Q5S007 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AC141586.1-203ENST00000567242 366 ntBASIC13.82□□□□□ -0.2
LRRK2Q5S007 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.81□□□□□ -0.2
LRRK2Q5S007 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 HOMER2P2-201ENST00000451621 847 ntBASIC13.81□□□□□ -0.2
LRRK2Q5S007 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 AC145423.3-201ENST00000615987 467 ntBASIC13.81□□□□□ -0.2
LRRK2Q5S007 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 AC007274.2-201ENST00000421675 662 ntBASIC13.81□□□□□ -0.2
LRRK2Q5S007 AC098935.1-201ENST00000446057 611 ntBASIC13.81□□□□□ -0.2
LRRK2Q5S007 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRK2Q5S007 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRK2Q5S007 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRK2Q5S007 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 AL161670.2-201ENST00000557650 1227 ntBASIC13.8□□□□□ -0.2
LRRK2Q5S007 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRK2Q5S007 AL133499.1-201ENST00000596207 608 ntBASIC13.8□□□□□ -0.2
LRRK2Q5S007 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms