Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 AL021920.2-201ENST00000624828 1351 ntBASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF3Q3KNV8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 MCCD1P2-201ENST00000423228 335 ntBASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 SLC25A6P2-201ENST00000497974 877 ntBASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 AC005412.3-201ENST00000580309 715 ntBASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF3Q3KNV8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 BCAR1-209ENST00000546196 1340 ntBASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms