Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DDR1Q08345 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.84■□□□□ 0.77
DDR1Q08345 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
DDR1Q08345 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.84■□□□□ 0.77
DDR1Q08345 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.84■□□□□ 0.77
DDR1Q08345 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.84■□□□□ 0.77
DDR1Q08345 ACTG1P17-201ENST00000558391 1119 ntBASIC19.84■□□□□ 0.77
DDR1Q08345 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.84■□□□□ 0.77
DDR1Q08345 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
DDR1Q08345 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DDR1Q08345 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.84■□□□□ 0.77
DDR1Q08345 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDR1Q08345 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.83■□□□□ 0.77
DDR1Q08345 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.83■□□□□ 0.77
DDR1Q08345 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.83■□□□□ 0.77
DDR1Q08345 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDR1Q08345 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.83■□□□□ 0.77
DDR1Q08345 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
DDR1Q08345 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDR1Q08345 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDR1Q08345 AC007969.1-201ENST00000433675 447 ntBASIC19.83■□□□□ 0.77
DDR1Q08345 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.83■□□□□ 0.77
DDR1Q08345 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
DDR1Q08345 AC025279.2-201ENST00000569730 653 ntBASIC19.83■□□□□ 0.77
DDR1Q08345 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.83■□□□□ 0.77
DDR1Q08345 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.83■□□□□ 0.77
DDR1Q08345 AC000095.1-201ENST00000603208 874 ntBASIC19.83■□□□□ 0.77
DDR1Q08345 AC106872.11-201ENST00000605838 421 ntBASIC19.83■□□□□ 0.77
DDR1Q08345 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DDR1Q08345 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
DDR1Q08345 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.83■□□□□ 0.77
DDR1Q08345 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.83■□□□□ 0.76
DDR1Q08345 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DDR1Q08345 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
DDR1Q08345 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
DDR1Q08345 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.76
DDR1Q08345 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDR1Q08345 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.83■□□□□ 0.76
DDR1Q08345 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DDR1Q08345 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDR1Q08345 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDR1Q08345 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDR1Q08345 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.83■□□□□ 0.76
DDR1Q08345 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
DDR1Q08345 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.82■□□□□ 0.76
DDR1Q08345 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
DDR1Q08345 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.82■□□□□ 0.76
DDR1Q08345 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DDR1Q08345 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
DDR1Q08345 C2orf27AP3-201ENST00000434123 579 ntBASIC19.82■□□□□ 0.76
DDR1Q08345 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.82■□□□□ 0.76
DDR1Q08345 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
DDR1Q08345 HNRNPUP1-201ENST00000554987 333 ntBASIC19.82■□□□□ 0.76
DDR1Q08345 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.82■□□□□ 0.76
DDR1Q08345 RN7SL190P-201ENST00000582519 257 ntBASIC19.82■□□□□ 0.76
DDR1Q08345 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.82■□□□□ 0.76
DDR1Q08345 AC005695.3-201ENST00000614522 232 ntBASIC19.82■□□□□ 0.76
DDR1Q08345 AL354718.3-201ENST00000616414 581 ntBASIC19.82■□□□□ 0.76
DDR1Q08345 AL008638.5-201ENST00000623814 1298 ntBASIC19.82■□□□□ 0.76
DDR1Q08345 CR382287.1-201ENST00000623954 586 ntBASIC19.82■□□□□ 0.76
DDR1Q08345 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.82■□□□□ 0.76
DDR1Q08345 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.82■□□□□ 0.76
DDR1Q08345 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 AC018470.1-201ENST00000624790 3129 ntBASIC19.82■□□□□ 0.76
DDR1Q08345 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDR1Q08345 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
DDR1Q08345 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.81■□□□□ 0.76
DDR1Q08345 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.81■□□□□ 0.76
DDR1Q08345 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 AC006001.1-201ENST00000325130 474 ntBASIC19.81■□□□□ 0.76
DDR1Q08345 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms