Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNRPFP62306 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SNRPFP62306 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNRPFP62306 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNRPFP62306 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNRPFP62306 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.54■□□□□ 0.4
SNRPFP62306 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRPFP62306 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SNRPFP62306 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SNRPFP62306 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRPFP62306 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRPFP62306 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.53■□□□□ 0.4
SNRPFP62306 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SNRPFP62306 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.53■□□□□ 0.4
SNRPFP62306 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRPFP62306 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRPFP62306 AC067863.1-201ENST00000494933 530 ntBASIC17.53■□□□□ 0.4
SNRPFP62306 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRPFP62306 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRPFP62306 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.53■□□□□ 0.4
SNRPFP62306 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.53■□□□□ 0.4
SNRPFP62306 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRPFP62306 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SNRPFP62306 KRT8P12-202ENST00000472924 1397 ntBASIC17.53■□□□□ 0.4
SNRPFP62306 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRPFP62306 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SNRPFP62306 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRPFP62306 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRPFP62306 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SNRPFP62306 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SNRPFP62306 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRPFP62306 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SNRPFP62306 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SNRPFP62306 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.52■□□□□ 0.4
SNRPFP62306 PHKG1P2-201ENST00000457537 863 ntBASIC17.52■□□□□ 0.4
SNRPFP62306 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRPFP62306 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRPFP62306 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.52■□□□□ 0.4
SNRPFP62306 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.52■□□□□ 0.4
SNRPFP62306 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.52■□□□□ 0.4
SNRPFP62306 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.52■□□□□ 0.4
SNRPFP62306 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.52■□□□□ 0.4
SNRPFP62306 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SNRPFP62306 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRPFP62306 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNRPFP62306 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.52■□□□□ 0.39
SNRPFP62306 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNRPFP62306 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNRPFP62306 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNRPFP62306 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNRPFP62306 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNRPFP62306 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNRPFP62306 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SNRPFP62306 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SNRPFP62306 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNRPFP62306 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.52■□□□□ 0.39
SNRPFP62306 AC018695.7-201ENST00000624587 2492 ntBASIC17.52■□□□□ 0.39
SNRPFP62306 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms