Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT3P56703 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.32■□□□□ 0.04
WNT3P56703 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT3P56703 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 AC211486.1-202ENST00000416371 468 ntBASIC15.32■□□□□ 0.04
WNT3P56703 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.32■□□□□ 0.04
WNT3P56703 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.32■□□□□ 0.04
WNT3P56703 AC211476.1-201ENST00000503899 468 ntBASIC15.32■□□□□ 0.04
WNT3P56703 PRYP6-201ENST00000514804 343 ntBASIC15.32■□□□□ 0.04
WNT3P56703 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.32■□□□□ 0.04
WNT3P56703 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT3P56703 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT3P56703 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
WNT3P56703 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
WNT3P56703 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
WNT3P56703 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
WNT3P56703 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3P56703 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3P56703 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 AC092850.2-201ENST00000623821 2697 ntBASIC15.31■□□□□ 0.04
WNT3P56703 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 AC020658.6-201ENST00000623564 1870 ntBASIC15.31■□□□□ 0.04
WNT3P56703 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
WNT3P56703 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.31■□□□□ 0.04
WNT3P56703 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 SSR4P1-203ENST00000599569 2260 ntBASIC15.31■□□□□ 0.04
WNT3P56703 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT3P56703 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT3P56703 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT3P56703 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3P56703 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.31■□□□□ 0.04
WNT3P56703 AC005829.1-201ENST00000570002 483 ntBASIC15.31■□□□□ 0.04
WNT3P56703 AP002472.1-201ENST00000577490 586 ntBASIC15.31■□□□□ 0.04
WNT3P56703 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3P56703 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
WNT3P56703 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3P56703 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3P56703 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
WNT3P56703 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3P56703 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
WNT3P56703 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3P56703 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3P56703 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
WNT3P56703 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT3P56703 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
WNT3P56703 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3P56703 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3P56703 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3P56703 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3P56703 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3P56703 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3P56703 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WNT3P56703 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3P56703 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3P56703 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms