Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CMC4P56277 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.07□□□□□ -0.48
CMC4P56277 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.07□□□□□ -0.48
CMC4P56277 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CMC4P56277 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CMC4P56277 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.06□□□□□ -0.48
CMC4P56277 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.06□□□□□ -0.48
CMC4P56277 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CMC4P56277 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.06□□□□□ -0.48
CMC4P56277 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.06□□□□□ -0.48
CMC4P56277 GPS2P2-201ENST00000430745 888 ntBASIC12.06□□□□□ -0.48
CMC4P56277 SPDYE14P-201ENST00000442619 822 ntBASIC12.06□□□□□ -0.48
CMC4P56277 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.06□□□□□ -0.48
CMC4P56277 SERBP1P3-201ENST00000459980 809 ntBASIC12.06□□□□□ -0.48
CMC4P56277 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.06□□□□□ -0.48
CMC4P56277 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.06□□□□□ -0.48
CMC4P56277 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.06□□□□□ -0.48
CMC4P56277 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.06□□□□□ -0.48
CMC4P56277 AC027612.4-201ENST00000605371 583 ntBASIC12.06□□□□□ -0.48
CMC4P56277 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.06□□□□□ -0.48
CMC4P56277 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.06□□□□□ -0.48
CMC4P56277 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.06□□□□□ -0.48
CMC4P56277 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.06□□□□□ -0.48
CMC4P56277 UBALD1-205ENST00000590891 2641 ntBASIC12.06□□□□□ -0.48
CMC4P56277 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
CMC4P56277 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CMC4P56277 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
CMC4P56277 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 AC097376.2-205ENST00000610159 5334 ntBASIC12.05□□□□□ -0.48
CMC4P56277 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.05□□□□□ -0.48
CMC4P56277 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CMC4P56277 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 FO393414.2-201ENST00000405153 598 ntBASIC12.05□□□□□ -0.48
CMC4P56277 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.05□□□□□ -0.48
CMC4P56277 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.05□□□□□ -0.48
CMC4P56277 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.05□□□□□ -0.48
CMC4P56277 KLF2P3-201ENST00000451977 1087 ntBASIC12.05□□□□□ -0.48
CMC4P56277 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 AC092183.1-201ENST00000469884 875 ntBASIC12.05□□□□□ -0.48
CMC4P56277 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.05□□□□□ -0.48
CMC4P56277 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.05□□□□□ -0.48
CMC4P56277 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CMC4P56277 AC140878.1-201ENST00000565277 250 ntBASIC12.05□□□□□ -0.48
CMC4P56277 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms