Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATP1B3P54709 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATP1B3P54709 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.13□□□□□ -0.15
ATP1B3P54709 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.13□□□□□ -0.15
ATP1B3P54709 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.13□□□□□ -0.15
ATP1B3P54709 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.13□□□□□ -0.15
ATP1B3P54709 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.13□□□□□ -0.15
ATP1B3P54709 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.13□□□□□ -0.15
ATP1B3P54709 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.13□□□□□ -0.15
ATP1B3P54709 FAAHP1-202ENST00000446499 1238 ntBASIC14.13□□□□□ -0.15
ATP1B3P54709 AC092910.1-201ENST00000482027 1129 ntBASIC14.13□□□□□ -0.15
ATP1B3P54709 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.13□□□□□ -0.15
ATP1B3P54709 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.13□□□□□ -0.15
ATP1B3P54709 AC117500.6-201ENST00000624871 588 ntBASIC14.13□□□□□ -0.15
ATP1B3P54709 FAM215A-202ENST00000632077 792 ntBASIC14.13□□□□□ -0.15
ATP1B3P54709 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 AL645728.2-201ENST00000641974 660 ntBASIC14.13□□□□□ -0.15
ATP1B3P54709 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.13□□□□□ -0.15
ATP1B3P54709 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.13□□□□□ -0.15
ATP1B3P54709 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ATP1B3P54709 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATP1B3P54709 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.12□□□□□ -0.15
ATP1B3P54709 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ATP1B3P54709 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 AC007326.2-201ENST00000624224 7579 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.12□□□□□ -0.15
ATP1B3P54709 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.12□□□□□ -0.15
ATP1B3P54709 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 TNRC18P2-201ENST00000417666 2714 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.12□□□□□ -0.15
ATP1B3P54709 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.12□□□□□ -0.15
ATP1B3P54709 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ATP1B3P54709 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.12□□□□□ -0.15
ATP1B3P54709 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.12□□□□□ -0.15
ATP1B3P54709 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.12□□□□□ -0.15
ATP1B3P54709 AL513480.1-201ENST00000451731 511 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 AC108751.1-201ENST00000490852 363 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 AC093909.1-201ENST00000504731 1122 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.12□□□□□ -0.15
ATP1B3P54709 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.12□□□□□ -0.15
ATP1B3P54709 AL031432.2-201ENST00000566714 459 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 AL928711.1-201ENST00000570165 459 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 OR7E47P-204ENST00000575924 449 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ATP1B3P54709 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.12□□□□□ -0.15
ATP1B3P54709 ACTL9-202ENST00000612068 1252 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.12□□□□□ -0.15
ATP1B3P54709 AL773604.1-201ENST00000617417 272 ntBASIC14.12□□□□□ -0.15
ATP1B3P54709 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATP1B3P54709 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.12□□□□□ -0.15
ATP1B3P54709 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
ATP1B3P54709 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATP1B3P54709 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.11□□□□□ -0.15
ATP1B3P54709 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms