Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR4P51571 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SSR4P51571 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.82□□□□□ -0.04
SSR4P51571 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 AC138761.1-201ENST00000584393 385 ntBASIC14.82□□□□□ -0.04
SSR4P51571 LINC02560-201ENST00000596379 459 ntBASIC14.82□□□□□ -0.04
SSR4P51571 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 AC009118.2-201ENST00000613275 655 ntBASIC14.82□□□□□ -0.04
SSR4P51571 AC008761.3-201ENST00000624803 892 ntBASIC14.82□□□□□ -0.04
SSR4P51571 AL033527.5-202ENST00000641632 1098 ntBASIC14.82□□□□□ -0.04
SSR4P51571 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SSR4P51571 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SSR4P51571 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.82□□□□□ -0.04
SSR4P51571 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR4P51571 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR4P51571 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SSR4P51571 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.81□□□□□ -0.04
SSR4P51571 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.81□□□□□ -0.04
SSR4P51571 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSR4P51571 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.81□□□□□ -0.04
SSR4P51571 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 AC006449.6-201ENST00000612330 2296 ntBASIC14.81□□□□□ -0.04
SSR4P51571 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR4P51571 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR4P51571 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.81□□□□□ -0.04
SSR4P51571 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
SSR4P51571 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR4P51571 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR4P51571 AC004987.2-201ENST00000395959 1148 ntBASIC14.81□□□□□ -0.04
SSR4P51571 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.81□□□□□ -0.04
SSR4P51571 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 AL512361.1-201ENST00000554200 418 ntBASIC14.81□□□□□ -0.04
SSR4P51571 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.81□□□□□ -0.04
SSR4P51571 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.81□□□□□ -0.04
SSR4P51571 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.81□□□□□ -0.04
SSR4P51571 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSR4P51571 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 AL691432.1-201ENST00000596308 1422 ntBASIC14.81□□□□□ -0.04
SSR4P51571 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 PCDHA14-201ENST00000506751 2298 ntBASIC14.81□□□□□ -0.04
SSR4P51571 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.81□□□□□ -0.04
SSR4P51571 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSR4P51571 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR4P51571 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR4P51571 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.8□□□□□ -0.04
SSR4P51571 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR4P51571 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.8□□□□□ -0.04
SSR4P51571 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SSR4P51571 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms