Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.13■□□□□ 0.49
TM4SF4P48230 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF4P48230 NKAIN1P1-201ENST00000435754 582 ntBASIC18.13■□□□□ 0.49
TM4SF4P48230 SPTLC1P5-201ENST00000450718 252 ntBASIC18.13■□□□□ 0.49
TM4SF4P48230 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.13■□□□□ 0.49
TM4SF4P48230 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 GAPDHP40-201ENST00000505218 1006 ntBASIC18.13■□□□□ 0.49
TM4SF4P48230 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TM4SF4P48230 AC134698.3-201ENST00000523880 214 ntBASIC18.13■□□□□ 0.49
TM4SF4P48230 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TM4SF4P48230 MIR3907-201ENST00000579424 151 ntBASIC18.13■□□□□ 0.49
TM4SF4P48230 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF4P48230 AL353726.2-201ENST00000623259 884 ntBASIC18.13■□□□□ 0.49
TM4SF4P48230 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF4P48230 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.13■□□□□ 0.49
TM4SF4P48230 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF4P48230 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF4P48230 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TM4SF4P48230 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TM4SF4P48230 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF4P48230 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF4P48230 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TM4SF4P48230 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.12■□□□□ 0.49
TM4SF4P48230 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TM4SF4P48230 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 AL008707.1-201ENST00000422498 534 ntBASIC18.12■□□□□ 0.49
TM4SF4P48230 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.12■□□□□ 0.49
TM4SF4P48230 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF4P48230 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.12■□□□□ 0.49
TM4SF4P48230 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.12■□□□□ 0.49
TM4SF4P48230 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF4P48230 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 TUBBP5-203ENST00000508529 1334 ntBASIC18.12■□□□□ 0.49
TM4SF4P48230 AC009053.2-201ENST00000563701 2365 ntBASIC18.12■□□□□ 0.49
TM4SF4P48230 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.12■□□□□ 0.49
TM4SF4P48230 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF4P48230 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
TM4SF4P48230 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF4P48230 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF4P48230 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.11■□□□□ 0.49
TM4SF4P48230 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 POU5F1P6-201ENST00000466990 990 ntBASIC18.11■□□□□ 0.49
TM4SF4P48230 AC008267.1-201ENST00000474858 1069 ntBASIC18.11■□□□□ 0.49
TM4SF4P48230 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF4P48230 AC044849.1-201ENST00000519737 1188 ntBASIC18.11■□□□□ 0.49
TM4SF4P48230 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.11■□□□□ 0.49
TM4SF4P48230 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.11■□□□□ 0.49
TM4SF4P48230 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TM4SF4P48230 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF4P48230 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.11■□□□□ 0.49
TM4SF4P48230 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF4P48230 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.11■□□□□ 0.49
TM4SF4P48230 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF4P48230 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.11■□□□□ 0.49
TM4SF4P48230 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 AL450472.2-201ENST00000603663 1156 ntBASIC18.11■□□□□ 0.49
TM4SF4P48230 AC097359.3-201ENST00000603982 1210 ntBASIC18.11■□□□□ 0.49
TM4SF4P48230 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF4P48230 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.11■□□□□ 0.49
TM4SF4P48230 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF4P48230 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF4P48230 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms