Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC087163.2-201ENST00000457299 853 ntBASIC11□□□□□ -0.65
CXCL5P42830 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11□□□□□ -0.65
CXCL5P42830 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
CXCL5P42830 CYP2A7P1-201ENST00000595391 815 ntBASIC11□□□□□ -0.65
CXCL5P42830 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 AL591684.3-201ENST00000605187 298 ntBASIC11□□□□□ -0.65
CXCL5P42830 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11□□□□□ -0.65
CXCL5P42830 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 CDC14C-201ENST00000428251 1719 ntBASIC11□□□□□ -0.65
CXCL5P42830 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CXCL5P42830 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11□□□□□ -0.65
CXCL5P42830 AP005117.1-201ENST00000584346 1413 ntBASIC11□□□□□ -0.65
CXCL5P42830 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
CXCL5P42830 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CXCL5P42830 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 REXO1L8P-201ENST00000604378 1897 ntBASIC11□□□□□ -0.65
CXCL5P42830 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CXCL5P42830 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
CXCL5P42830 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CXCL5P42830 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC10.99□□□□□ -0.65
CXCL5P42830 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC10.99□□□□□ -0.65
CXCL5P42830 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 NUS1P2-201ENST00000417358 873 ntBASIC10.99□□□□□ -0.65
CXCL5P42830 KRT16P4-201ENST00000453883 522 ntBASIC10.99□□□□□ -0.65
CXCL5P42830 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.99□□□□□ -0.65
CXCL5P42830 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC10.99□□□□□ -0.65
CXCL5P42830 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC10.99□□□□□ -0.65
CXCL5P42830 AC139887.3-201ENST00000568585 713 ntBASIC10.99□□□□□ -0.65
CXCL5P42830 MIR5100-201ENST00000579544 119 ntBASIC10.99□□□□□ -0.65
CXCL5P42830 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 AC099336.1-202ENST00000602961 463 ntBASIC10.99□□□□□ -0.65
CXCL5P42830 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CXCL5P42830 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC10.99□□□□□ -0.65
CXCL5P42830 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CXCL5P42830 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
CXCL5P42830 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
CXCL5P42830 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CXCL5P42830 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms