Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CEACAM3P40198 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CEACAM3P40198 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CEACAM3P40198 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.27□□□□□ -0.29
CEACAM3P40198 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.27□□□□□ -0.29
CEACAM3P40198 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CEACAM3P40198 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CEACAM3P40198 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CEACAM3P40198 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CEACAM3P40198 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 HLA-H-201ENST00000383620 1096 ntBASIC13.26□□□□□ -0.29
CEACAM3P40198 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CEACAM3P40198 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CEACAM3P40198 CNN2P11-201ENST00000429351 262 ntBASIC13.26□□□□□ -0.29
CEACAM3P40198 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.26□□□□□ -0.29
CEACAM3P40198 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.26□□□□□ -0.29
CEACAM3P40198 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.26□□□□□ -0.29
CEACAM3P40198 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.26□□□□□ -0.29
CEACAM3P40198 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.26□□□□□ -0.29
CEACAM3P40198 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.26□□□□□ -0.29
CEACAM3P40198 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.26□□□□□ -0.29
CEACAM3P40198 AL592424.1-201ENST00000563624 1536 ntBASIC13.26□□□□□ -0.29
CEACAM3P40198 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.26□□□□□ -0.29
CEACAM3P40198 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.26□□□□□ -0.29
CEACAM3P40198 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.26□□□□□ -0.29
CEACAM3P40198 AP000842.3-202ENST00000569238 1080 ntBASIC13.26□□□□□ -0.29
CEACAM3P40198 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
CEACAM3P40198 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.26□□□□□ -0.29
CEACAM3P40198 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CEACAM3P40198 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
CEACAM3P40198 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.26□□□□□ -0.29
CEACAM3P40198 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CEACAM3P40198 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CEACAM3P40198 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CEACAM3P40198 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CEACAM3P40198 AL589702.1-201ENST00000641229 1509 ntBASIC13.25□□□□□ -0.29
CEACAM3P40198 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.25□□□□□ -0.29
CEACAM3P40198 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
CEACAM3P40198 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.25□□□□□ -0.29
CEACAM3P40198 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 MIR346-201ENST00000362234 95 ntBASIC13.25□□□□□ -0.29
CEACAM3P40198 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.25□□□□□ -0.29
CEACAM3P40198 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CEACAM3P40198 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 AC004461.1-201ENST00000412461 403 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms