Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.04■□□□□ 0.32
GRIK1P39086 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.04■□□□□ 0.32
GRIK1P39086 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
GRIK1P39086 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.04■□□□□ 0.32
GRIK1P39086 MRPS18AP1-201ENST00000414458 589 ntBASIC17.04■□□□□ 0.32
GRIK1P39086 AC002472.2-201ENST00000442739 958 ntBASIC17.04■□□□□ 0.32
GRIK1P39086 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.04■□□□□ 0.32
GRIK1P39086 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.04■□□□□ 0.32
GRIK1P39086 RN7SL204P-201ENST00000582831 262 ntBASIC17.04■□□□□ 0.32
GRIK1P39086 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.04■□□□□ 0.32
GRIK1P39086 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.04■□□□□ 0.32
GRIK1P39086 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GRIK1P39086 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 AL136982.4-201ENST00000437689 1740 ntBASIC17.04■□□□□ 0.32
GRIK1P39086 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
GRIK1P39086 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 TNRC18P3-201ENST00000441896 2691 ntBASIC17.04■□□□□ 0.32
GRIK1P39086 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GRIK1P39086 KRT8P12-202ENST00000472924 1397 ntBASIC17.03■□□□□ 0.32
GRIK1P39086 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.03■□□□□ 0.32
GRIK1P39086 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.03■□□□□ 0.32
GRIK1P39086 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.03■□□□□ 0.32
GRIK1P39086 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.03■□□□□ 0.32
GRIK1P39086 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GRIK1P39086 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.03■□□□□ 0.32
GRIK1P39086 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.03■□□□□ 0.32
GRIK1P39086 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.03■□□□□ 0.32
GRIK1P39086 AC138761.1-201ENST00000584393 385 ntBASIC17.03■□□□□ 0.32
GRIK1P39086 LINC02560-201ENST00000596379 459 ntBASIC17.03■□□□□ 0.32
GRIK1P39086 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.03■□□□□ 0.32
GRIK1P39086 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
GRIK1P39086 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
GRIK1P39086 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
GRIK1P39086 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.03■□□□□ 0.32
GRIK1P39086 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.03■□□□□ 0.32
GRIK1P39086 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GRIK1P39086 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.02■□□□□ 0.32
GRIK1P39086 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms