Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.14■□□□□ 0.81
RFC4P35249 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.14■□□□□ 0.81
RFC4P35249 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC4P35249 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.14■□□□□ 0.81
RFC4P35249 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.14■□□□□ 0.81
RFC4P35249 RHOXF1P1-202ENST00000635473 501 ntBASIC20.14■□□□□ 0.81
RFC4P35249 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RFC4P35249 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.14■□□□□ 0.81
RFC4P35249 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC4P35249 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC4P35249 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC4P35249 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RFC4P35249 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RFC4P35249 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
RFC4P35249 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RFC4P35249 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.13■□□□□ 0.81
RFC4P35249 C2orf69P2-201ENST00000562032 1123 ntBASIC20.13■□□□□ 0.81
RFC4P35249 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RFC4P35249 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RFC4P35249 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC4P35249 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC4P35249 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC4P35249 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFC4P35249 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RFC4P35249 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFC4P35249 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC4P35249 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC4P35249 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC4P35249 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.12■□□□□ 0.81
RFC4P35249 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC4P35249 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
RFC4P35249 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RFC4P35249 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
RFC4P35249 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC4P35249 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFC4P35249 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFC4P35249 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFC4P35249 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.12■□□□□ 0.81
RFC4P35249 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC4P35249 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.12■□□□□ 0.81
RFC4P35249 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.12■□□□□ 0.81
RFC4P35249 KRT8P13-201ENST00000463294 1010 ntBASIC20.12■□□□□ 0.81
RFC4P35249 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC4P35249 KRT90P-201ENST00000549264 1064 ntBASIC20.12■□□□□ 0.81
RFC4P35249 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC4P35249 DUX4L45-201ENST00000566406 1057 ntBASIC20.12■□□□□ 0.81
RFC4P35249 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
RFC4P35249 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RFC4P35249 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 AC005252.2-201ENST00000624630 1141 ntBASIC20.12■□□□□ 0.81
RFC4P35249 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFC4P35249 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.12■□□□□ 0.81
RFC4P35249 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFC4P35249 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFC4P35249 BNIP3P1-202ENST00000550043 1585 ntBASIC20.12■□□□□ 0.81
RFC4P35249 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 NOC2LP2-201ENST00000407594 1944 ntBASIC20.12■□□□□ 0.81
RFC4P35249 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC4P35249 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RFC4P35249 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
RFC4P35249 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.11■□□□□ 0.81
RFC4P35249 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC4P35249 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 PKD1P1-201ENST00000458669 6805 ntBASIC20.11■□□□□ 0.81
RFC4P35249 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC4P35249 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFC4P35249 AC245100.5-201ENST00000452108 331 ntBASIC20.11■□□□□ 0.81
RFC4P35249 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC4P35249 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.11■□□□□ 0.81
RFC4P35249 AL118558.3-201ENST00000607414 1079 ntBASIC20.11■□□□□ 0.81
RFC4P35249 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.11■□□□□ 0.81
RFC4P35249 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms