Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 AP005117.1-201ENST00000584346 1413 ntBASIC19.41■□□□□ 0.7
NCLP19338 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.41■□□□□ 0.7
NCLP19338 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NCLP19338 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
NCLP19338 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NCLP19338 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.4■□□□□ 0.7
NCLP19338 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC19.4■□□□□ 0.7
NCLP19338 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
NCLP19338 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.4■□□□□ 0.7
NCLP19338 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.4■□□□□ 0.7
NCLP19338 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NCLP19338 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 AL022342.1-201ENST00000400363 863 ntBASIC19.4■□□□□ 0.7
NCLP19338 AF186996.4-201ENST00000467186 377 ntBASIC19.4■□□□□ 0.7
NCLP19338 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.4■□□□□ 0.7
NCLP19338 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.4■□□□□ 0.7
NCLP19338 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.4■□□□□ 0.7
NCLP19338 AC002310.6-201ENST00000624451 1377 ntBASIC19.4■□□□□ 0.7
NCLP19338 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NCLP19338 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.4■□□□□ 0.7
NCLP19338 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.4■□□□□ 0.7
NCLP19338 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC19.4■□□□□ 0.7
NCLP19338 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLP19338 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.4■□□□□ 0.7
NCLP19338 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NCLP19338 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NCLP19338 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.39■□□□□ 0.7
NCLP19338 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC19.39■□□□□ 0.7
NCLP19338 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.39■□□□□ 0.7
NCLP19338 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
NCLP19338 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLP19338 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.39■□□□□ 0.69
NCLP19338 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLP19338 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.39■□□□□ 0.69
NCLP19338 AC018712.1-201ENST00000455767 687 ntBASIC19.39■□□□□ 0.69
NCLP19338 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.39■□□□□ 0.69
NCLP19338 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.39■□□□□ 0.69
NCLP19338 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.39■□□□□ 0.69
NCLP19338 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLP19338 AC073592.4-201ENST00000623827 446 ntBASIC19.39■□□□□ 0.69
NCLP19338 AC148477.8-201ENST00000624298 468 ntBASIC19.39■□□□□ 0.69
NCLP19338 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.39■□□□□ 0.69
NCLP19338 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NCLP19338 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NCLP19338 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
NCLP19338 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLP19338 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLP19338 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLP19338 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLP19338 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.39■□□□□ 0.69
NCLP19338 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLP19338 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLP19338 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLP19338 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLP19338 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLP19338 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NCLP19338 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLP19338 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLP19338 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NCLP19338 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLP19338 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLP19338 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLP19338 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLP19338 AL031284.1-201ENST00000419297 478 ntBASIC19.38■□□□□ 0.69
NCLP19338 GGT3P-204ENST00000453783 1664 ntBASIC19.38■□□□□ 0.69
NCLP19338 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLP19338 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLP19338 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
NCLP19338 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLP19338 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLP19338 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLP19338 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.38■□□□□ 0.69
NCLP19338 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLP19338 AC013467.2-201ENST00000605472 835 ntBASIC19.38■□□□□ 0.69
NCLP19338 AL353135.1-201ENST00000606729 504 ntBASIC19.38■□□□□ 0.69
NCLP19338 BX640515.1-201ENST00000617215 977 ntBASIC19.38■□□□□ 0.69
NCLP19338 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.38■□□□□ 0.69
NCLP19338 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms