Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCL2P13500 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL2P13500 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCL2P13500 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL2P13500 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL2P13500 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL2P13500 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.15□□□□□ -0.14
CCL2P13500 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 AC098859.1-201ENST00000502915 1238 ntBASIC14.15□□□□□ -0.14
CCL2P13500 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.15□□□□□ -0.14
CCL2P13500 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CCL2P13500 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.15□□□□□ -0.14
CCL2P13500 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCL2P13500 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL2P13500 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL2P13500 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL2P13500 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CCL2P13500 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCL2P13500 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
CCL2P13500 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL2P13500 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CCL2P13500 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL2P13500 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL2P13500 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL2P13500 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL2P13500 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL2P13500 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCL2P13500 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL2P13500 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL2P13500 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL2P13500 AL391005.1-201ENST00000623953 2435 ntBASIC14.14□□□□□ -0.15
CCL2P13500 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL2P13500 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL2P13500 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL2P13500 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms