Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP1P11387 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.03■□□□□ 0.64
TOP1P11387 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.03■□□□□ 0.64
TOP1P11387 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.03■□□□□ 0.64
TOP1P11387 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP1P11387 AC093214.1-201ENST00000511688 1107 ntBASIC19.03■□□□□ 0.64
TOP1P11387 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.03■□□□□ 0.64
TOP1P11387 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 AC011467.4-201ENST00000594891 528 ntBASIC19.03■□□□□ 0.64
TOP1P11387 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP1P11387 AC073592.8-201ENST00000624126 511 ntBASIC19.03■□□□□ 0.64
TOP1P11387 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TOP1P11387 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
TOP1P11387 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TOP1P11387 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.02■□□□□ 0.64
TOP1P11387 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.02■□□□□ 0.64
TOP1P11387 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 AL592424.1-201ENST00000563624 1536 ntBASIC19.02■□□□□ 0.64
TOP1P11387 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TOP1P11387 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TOP1P11387 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.02■□□□□ 0.64
TOP1P11387 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.02■□□□□ 0.64
TOP1P11387 IGHV3-42-201ENST00000520410 361 ntBASIC19.02■□□□□ 0.64
TOP1P11387 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.02■□□□□ 0.64
TOP1P11387 SPCS2P1-201ENST00000561636 679 ntBASIC19.02■□□□□ 0.64
TOP1P11387 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.02■□□□□ 0.64
TOP1P11387 SPDYE12P-201ENST00000618416 771 ntBASIC19.02■□□□□ 0.64
TOP1P11387 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TOP1P11387 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TOP1P11387 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.02■□□□□ 0.63
TOP1P11387 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TOP1P11387 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.02■□□□□ 0.63
TOP1P11387 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
TOP1P11387 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
TOP1P11387 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TOP1P11387 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.01■□□□□ 0.63
TOP1P11387 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.01■□□□□ 0.63
TOP1P11387 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.01■□□□□ 0.63
TOP1P11387 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.01■□□□□ 0.63
TOP1P11387 BASP1P1-201ENST00000430708 665 ntBASIC19.01■□□□□ 0.63
TOP1P11387 MTND6P24-201ENST00000440466 518 ntBASIC19.01■□□□□ 0.63
TOP1P11387 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 HLA-V-204ENST00000476601 1289 ntBASIC19.01■□□□□ 0.63
TOP1P11387 RNA5SP421-201ENST00000516864 134 ntBASIC19.01■□□□□ 0.63
TOP1P11387 MIR4321-201ENST00000592276 80 ntBASIC19.01■□□□□ 0.63
TOP1P11387 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.01■□□□□ 0.63
TOP1P11387 AL133215.2-201ENST00000609242 977 ntBASIC19.01■□□□□ 0.63
TOP1P11387 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
TOP1P11387 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.01■□□□□ 0.63
TOP1P11387 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TOP1P11387 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.01■□□□□ 0.63
TOP1P11387 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.01■□□□□ 0.63
TOP1P11387 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.01■□□□□ 0.63
TOP1P11387 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.01■□□□□ 0.63
TOP1P11387 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TOP1P11387 PCDHA1-201ENST00000378133 2726 ntBASIC19.01■□□□□ 0.63
TOP1P11387 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP1P11387 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TOP1P11387 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19■□□□□ 0.63
TOP1P11387 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms