Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
THRAP10827 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
THRAP10827 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
THRAP10827 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
THRAP10827 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THRAP10827 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.33■□□□□ 0.2
THRAP10827 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THRAP10827 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.33■□□□□ 0.2
THRAP10827 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
THRAP10827 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
THRAP10827 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
THRAP10827 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
THRAP10827 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
THRAP10827 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
THRAP10827 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.32■□□□□ 0.2
THRAP10827 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.32■□□□□ 0.2
THRAP10827 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.32■□□□□ 0.2
THRAP10827 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 AC140658.5-201ENST00000438532 169 ntBASIC16.32■□□□□ 0.2
THRAP10827 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.32■□□□□ 0.2
THRAP10827 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.32■□□□□ 0.2
THRAP10827 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
THRAP10827 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.32■□□□□ 0.2
THRAP10827 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
THRAP10827 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.32■□□□□ 0.2
THRAP10827 AL603832.2-201ENST00000566195 2125 ntBASIC16.32■□□□□ 0.2
THRAP10827 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.32■□□□□ 0.2
THRAP10827 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.32■□□□□ 0.2
THRAP10827 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
THRAP10827 AC093028.1-201ENST00000622998 982 ntBASIC16.32■□□□□ 0.2
THRAP10827 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.32■□□□□ 0.2
THRAP10827 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
THRAP10827 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.32■□□□□ 0.2
THRAP10827 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THRAP10827 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
THRAP10827 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
THRAP10827 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.31■□□□□ 0.2
THRAP10827 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
THRAP10827 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.31■□□□□ 0.2
THRAP10827 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
THRAP10827 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
THRAP10827 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
THRAP10827 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 AL139400.1-201ENST00000366220 510 ntBASIC16.31■□□□□ 0.2
THRAP10827 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 AL355306.1-201ENST00000415580 579 ntBASIC16.31■□□□□ 0.2
THRAP10827 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.31■□□□□ 0.2
THRAP10827 AC023141.5-201ENST00000458585 616 ntBASIC16.31■□□□□ 0.2
THRAP10827 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
THRAP10827 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.31■□□□□ 0.2
THRAP10827 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.31■□□□□ 0.2
THRAP10827 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.31■□□□□ 0.2
THRAP10827 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
THRAP10827 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.31■□□□□ 0.2
THRAP10827 AC099522.2-201ENST00000607001 744 ntBASIC16.31■□□□□ 0.2
THRAP10827 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.31■□□□□ 0.2
THRAP10827 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.31■□□□□ 0.2
THRAP10827 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
THRAP10827 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
THRAP10827 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
THRAP10827 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
THRAP10827 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
THRAP10827 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms