Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 AC112191.1-201ENST00000523689 701 ntBASIC17.03■□□□□ 0.32
RARAP10276 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.03■□□□□ 0.32
RARAP10276 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.03■□□□□ 0.32
RARAP10276 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.03■□□□□ 0.32
RARAP10276 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.03■□□□□ 0.32
RARAP10276 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RARAP10276 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.02■□□□□ 0.32
RARAP10276 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RARAP10276 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RARAP10276 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 AL022342.1-201ENST00000400363 863 ntBASIC17.02■□□□□ 0.32
RARAP10276 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.02■□□□□ 0.32
RARAP10276 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RARAP10276 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.02■□□□□ 0.32
RARAP10276 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.02■□□□□ 0.32
RARAP10276 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.02■□□□□ 0.32
RARAP10276 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RARAP10276 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.02■□□□□ 0.31
RARAP10276 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RARAP10276 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RARAP10276 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RARAP10276 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RARAP10276 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.02■□□□□ 0.31
RARAP10276 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RARAP10276 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RARAP10276 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RARAP10276 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
RARAP10276 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RARAP10276 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RARAP10276 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 AC022532.1-201ENST00000624563 1728 ntBASIC17.01■□□□□ 0.31
RARAP10276 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RARAP10276 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RARAP10276 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RARAP10276 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.01■□□□□ 0.31
RARAP10276 AC099063.4-201ENST00000641099 1602 ntBASIC17.01■□□□□ 0.31
RARAP10276 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.01■□□□□ 0.31
RARAP10276 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 PGAM5P1-201ENST00000518923 814 ntBASIC17.01■□□□□ 0.31
RARAP10276 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.01■□□□□ 0.31
RARAP10276 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.01■□□□□ 0.31
RARAP10276 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RARAP10276 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.01■□□□□ 0.31
RARAP10276 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.01■□□□□ 0.31
RARAP10276 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.01■□□□□ 0.31
RARAP10276 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.01■□□□□ 0.31
RARAP10276 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RARAP10276 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.01■□□□□ 0.31
RARAP10276 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 AC008677.1-201ENST00000519230 1561 ntBASIC17.01■□□□□ 0.31
RARAP10276 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.01■□□□□ 0.31
RARAP10276 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
RARAP10276 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.01■□□□□ 0.31
RARAP10276 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RARAP10276 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.01■□□□□ 0.31
RARAP10276 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RARAP10276 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.01■□□□□ 0.31
RARAP10276 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RARAP10276 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms