Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.29■□□□□ 0.2
SRPRAP08240 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SRPRAP08240 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 AP001282.1-201ENST00000531301 1499 ntBASIC16.29■□□□□ 0.2
SRPRAP08240 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 AL391825.1-201ENST00000457671 1364 ntBASIC16.28■□□□□ 0.2
SRPRAP08240 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.28■□□□□ 0.2
SRPRAP08240 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.28■□□□□ 0.2
SRPRAP08240 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SRPRAP08240 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.28■□□□□ 0.2
SRPRAP08240 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 HAUS4P1-201ENST00000406739 1145 ntBASIC16.28■□□□□ 0.2
SRPRAP08240 DFFBP1-201ENST00000433250 979 ntBASIC16.28■□□□□ 0.2
SRPRAP08240 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.28■□□□□ 0.2
SRPRAP08240 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.28■□□□□ 0.2
SRPRAP08240 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.28■□□□□ 0.2
SRPRAP08240 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SRPRAP08240 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.28■□□□□ 0.2
SRPRAP08240 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
SRPRAP08240 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
SRPRAP08240 AC025048.3-201ENST00000590609 569 ntBASIC16.28■□□□□ 0.2
SRPRAP08240 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.28■□□□□ 0.2
SRPRAP08240 AL132655.2-201ENST00000596276 594 ntBASIC16.28■□□□□ 0.2
SRPRAP08240 AC074044.1-201ENST00000609673 707 ntBASIC16.28■□□□□ 0.2
SRPRAP08240 AC005702.4-201ENST00000618393 416 ntBASIC16.28■□□□□ 0.2
SRPRAP08240 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 AC004461.2-201ENST00000629517 803 ntBASIC16.28■□□□□ 0.2
SRPRAP08240 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.28■□□□□ 0.2
SRPRAP08240 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SRPRAP08240 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SRPRAP08240 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SRPRAP08240 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.28■□□□□ 0.2
SRPRAP08240 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
SRPRAP08240 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 AC007541.1-201ENST00000570282 1469 ntBASIC16.28■□□□□ 0.2
SRPRAP08240 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPRAP08240 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
SRPRAP08240 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SRPRAP08240 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SRPRAP08240 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.27■□□□□ 0.2
SRPRAP08240 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.27■□□□□ 0.2
SRPRAP08240 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SRPRAP08240 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SRPRAP08240 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.2
SRPRAP08240 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.27■□□□□ 0.2
SRPRAP08240 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.27■□□□□ 0.2
SRPRAP08240 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.27■□□□□ 0.2
SRPRAP08240 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.27■□□□□ 0.2
SRPRAP08240 AC093004.1-201ENST00000508850 424 ntBASIC16.27■□□□□ 0.2
SRPRAP08240 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.27■□□□□ 0.2
SRPRAP08240 SRD5A3P1-201ENST00000603021 949 ntBASIC16.27■□□□□ 0.2
SRPRAP08240 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPRAP08240 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms