Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H2ABP04908 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 IGLL3P-201ENST00000412472 434 ntBASIC14.85□□□□□ -0.03
HIST1H2ABP04908 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 AC009078.2-202ENST00000463353 338 ntBASIC14.85□□□□□ -0.03
HIST1H2ABP04908 KRT18P34-201ENST00000488218 1270 ntBASIC14.85□□□□□ -0.03
HIST1H2ABP04908 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 AC010507.1-201ENST00000633895 436 ntBASIC14.85□□□□□ -0.03
HIST1H2ABP04908 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H2ABP04908 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 RHOQP3-201ENST00000437982 621 ntBASIC14.84□□□□□ -0.03
HIST1H2ABP04908 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2ABP04908 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms