Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AL139424.1-201ENST00000607572 797 ntBASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AC004706.3-202ENST00000621574 984 ntBASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AC107918.4-202ENST00000641623 219 ntBASIC14.65□□□□□ -0.06
HLA-DPB1P04440 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AL365209.1-201ENST00000624418 6473 ntBASIC14.65□□□□□ -0.06
HLA-DPB1P04440 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AL590787.1-201ENST00000568856 1315 ntBASIC14.65□□□□□ -0.06
HLA-DPB1P04440 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 MRPL3P1-201ENST00000400109 1033 ntBASIC14.64□□□□□ -0.07
HLA-DPB1P04440 LAGE3P1-201ENST00000425356 484 ntBASIC14.64□□□□□ -0.07
HLA-DPB1P04440 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 AC018712.1-201ENST00000455767 687 ntBASIC14.64□□□□□ -0.07
HLA-DPB1P04440 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.64□□□□□ -0.07
HLA-DPB1P04440 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 GPAA1P2-202ENST00000606848 1787 ntBASIC14.64□□□□□ -0.07
HLA-DPB1P04440 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPB1P04440 AC006504.4-201ENST00000592118 1568 ntBASIC14.64□□□□□ -0.07
HLA-DPB1P04440 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 SSR4P1-203ENST00000599569 2260 ntBASIC14.63□□□□□ -0.07
HLA-DPB1P04440 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 OR2I1P-209ENST00000641730 5365 ntBASIC14.63□□□□□ -0.07
HLA-DPB1P04440 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms