Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.36■□□□□ 0.05
MT-ND1P03886 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 AC138035.3-201ENST00000622706 2791 ntBASIC15.36■□□□□ 0.05
MT-ND1P03886 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND1P03886 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND1P03886 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND1P03886 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND1P03886 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND1P03886 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND1P03886 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
MT-ND1P03886 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MT-ND1P03886 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND1P03886 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.35■□□□□ 0.05
MT-ND1P03886 MIR648-201ENST00000385046 94 ntBASIC15.35■□□□□ 0.05
MT-ND1P03886 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.35■□□□□ 0.05
MT-ND1P03886 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MT-ND1P03886 AC139887.3-201ENST00000568585 713 ntBASIC15.35■□□□□ 0.05
MT-ND1P03886 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND1P03886 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND1P03886 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MT-ND1P03886 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MT-ND1P03886 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND1P03886 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND1P03886 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND1P03886 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND1P03886 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 CICP24-201ENST00000605464 2705 ntBASIC15.35■□□□□ 0.05
MT-ND1P03886 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND1P03886 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MT-ND1P03886 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND1P03886 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND1P03886 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.34■□□□□ 0.05
MT-ND1P03886 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.34■□□□□ 0.05
MT-ND1P03886 TSPY19P-201ENST00000418461 509 ntBASIC15.34■□□□□ 0.05
MT-ND1P03886 TSPY18P-201ENST00000441642 509 ntBASIC15.34■□□□□ 0.05
MT-ND1P03886 FGFR3P6-201ENST00000457012 610 ntBASIC15.34■□□□□ 0.05
MT-ND1P03886 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.34■□□□□ 0.05
MT-ND1P03886 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 AC091304.2-201ENST00000564639 760 ntBASIC15.34■□□□□ 0.05
MT-ND1P03886 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.34■□□□□ 0.05
MT-ND1P03886 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.34■□□□□ 0.05
MT-ND1P03886 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.34■□□□□ 0.05
MT-ND1P03886 AC008608.2-201ENST00000606089 416 ntBASIC15.34■□□□□ 0.05
MT-ND1P03886 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.34■□□□□ 0.05
MT-ND1P03886 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.34■□□□□ 0.05
MT-ND1P03886 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.34■□□□□ 0.05
MT-ND1P03886 AL109954.1-202ENST00000564051 2148 ntBASIC15.34■□□□□ 0.05
MT-ND1P03886 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND1P03886 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.34■□□□□ 0.05
MT-ND1P03886 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.33■□□□□ 0.05
MT-ND1P03886 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
MT-ND1P03886 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
MT-ND1P03886 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MT-ND1P03886 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MT-ND1P03886 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.33■□□□□ 0.05
MT-ND1P03886 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
MT-ND1P03886 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms