Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 AC005521.1-201ENST00000393351 872 ntBASIC12.25□□□□□ -0.45
HLA-DQA1P01909 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 KRT18P48-201ENST00000434763 852 ntBASIC12.25□□□□□ -0.45
HLA-DQA1P01909 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 AC068472.1-201ENST00000474589 881 ntBASIC12.25□□□□□ -0.45
HLA-DQA1P01909 COX11P1-201ENST00000489116 835 ntBASIC12.25□□□□□ -0.45
HLA-DQA1P01909 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.25□□□□□ -0.45
HLA-DQA1P01909 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DQA1P01909 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 AC007686.3-201ENST00000619017 3487 ntBASIC12.24□□□□□ -0.45
HLA-DQA1P01909 AP003680.1-201ENST00000598970 3660 ntBASIC12.24□□□□□ -0.45
HLA-DQA1P01909 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.24□□□□□ -0.45
HLA-DQA1P01909 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.24□□□□□ -0.45
HLA-DQA1P01909 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms