Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 AL512356.2-201ENST00000546955 174 ntBASIC17.4■□□□□ 0.38
HLA-DRAP01903 BANF1P1-201ENST00000553684 263 ntBASIC17.4■□□□□ 0.38
HLA-DRAP01903 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 MIR6080-201ENST00000617359 66 ntBASIC17.4■□□□□ 0.38
HLA-DRAP01903 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DRAP01903 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DRAP01903 AL365203.3-201ENST00000609742 2057 ntBASIC17.4■□□□□ 0.38
HLA-DRAP01903 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DRAP01903 AL691432.1-201ENST00000596308 1422 ntBASIC17.39■□□□□ 0.38
HLA-DRAP01903 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 AL136982.4-201ENST00000437689 1740 ntBASIC17.39■□□□□ 0.37
HLA-DRAP01903 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 AL353705.2-201ENST00000428243 662 ntBASIC17.39■□□□□ 0.37
HLA-DRAP01903 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 MIR4453-201ENST00000584019 89 ntBASIC17.39■□□□□ 0.37
HLA-DRAP01903 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DRAP01903 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DRAP01903 AC134407.2-201ENST00000625089 1978 ntBASIC17.39■□□□□ 0.37
HLA-DRAP01903 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 AC008741.2-201ENST00000612792 3115 ntBASIC17.38■□□□□ 0.37
HLA-DRAP01903 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 AP001282.1-201ENST00000531301 1499 ntBASIC17.38■□□□□ 0.37
HLA-DRAP01903 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.38■□□□□ 0.37
HLA-DRAP01903 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 AC105021.1-202ENST00000570572 669 ntBASIC17.38■□□□□ 0.37
HLA-DRAP01903 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DRAP01903 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DRAP01903 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms