Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.94■□□□□ 0.3
BEST1O76090 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.94■□□□□ 0.3
BEST1O76090 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BEST1O76090 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BEST1O76090 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
BEST1O76090 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.93■□□□□ 0.3
BEST1O76090 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST1O76090 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
BEST1O76090 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.93■□□□□ 0.3
BEST1O76090 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.93■□□□□ 0.3
BEST1O76090 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 AC008738.7-201ENST00000609744 511 ntBASIC16.93■□□□□ 0.3
BEST1O76090 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.93■□□□□ 0.3
BEST1O76090 AL033527.5-202ENST00000641632 1098 ntBASIC16.93■□□□□ 0.3
BEST1O76090 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
BEST1O76090 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
BEST1O76090 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 AC022144.1-201ENST00000602255 1580 ntBASIC16.93■□□□□ 0.3
BEST1O76090 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
BEST1O76090 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST1O76090 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.93■□□□□ 0.3
BEST1O76090 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
BEST1O76090 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
BEST1O76090 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
BEST1O76090 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.92■□□□□ 0.3
BEST1O76090 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 MIR648-201ENST00000385046 94 ntBASIC16.92■□□□□ 0.3
BEST1O76090 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 TSPY16P-201ENST00000449843 468 ntBASIC16.92■□□□□ 0.3
BEST1O76090 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.92■□□□□ 0.3
BEST1O76090 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 AC004840.1-201ENST00000636359 365 ntBASIC16.92■□□□□ 0.3
BEST1O76090 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
BEST1O76090 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
BEST1O76090 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BEST1O76090 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST1O76090 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BEST1O76090 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST1O76090 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BEST1O76090 AC018892.3-201ENST00000623986 2499 ntBASIC16.91■□□□□ 0.3
BEST1O76090 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BEST1O76090 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST1O76090 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.91■□□□□ 0.3
BEST1O76090 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.91■□□□□ 0.3
BEST1O76090 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.91■□□□□ 0.3
BEST1O76090 KRT8P37-201ENST00000451609 1420 ntBASIC16.91■□□□□ 0.3
BEST1O76090 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BEST1O76090 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST1O76090 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms