Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 FAM86KP-201ENST00000509817 987 ntBASIC7.07□□□□□ -1.28
USH2AO75445 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC7.07□□□□□ -1.28
USH2AO75445 AC013467.2-201ENST00000605472 835 ntBASIC7.07□□□□□ -1.28
USH2AO75445 AC007718.1-201ENST00000621078 280 ntBASIC7.07□□□□□ -1.28
USH2AO75445 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 BOC-212ENST00000485230 2173 ntTSL 2 BASIC7.07□□□□□ -1.28
USH2AO75445 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC7.07□□□□□ -1.28
USH2AO75445 FXR1-221ENST00000491674 365 ntTSL 2 BASIC7.07□□□□□ -1.28
USH2AO75445 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 AC138894.2-201ENST00000602838 371 ntBASIC7.07□□□□□ -1.28
USH2AO75445 AC010503.4-201ENST00000615487 688 ntBASIC7.07□□□□□ -1.28
USH2AO75445 AC244250.3-201ENST00000620749 366 ntBASIC7.07□□□□□ -1.28
USH2AO75445 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC7.07□□□□□ -1.28
USH2AO75445 AC018695.7-201ENST00000624587 2492 ntBASIC7.07□□□□□ -1.28
USH2AO75445 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 HNRNPA1P63-201ENST00000427917 963 ntBASIC7.07□□□□□ -1.28
USH2AO75445 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC7.07□□□□□ -1.28
USH2AO75445 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC7.07□□□□□ -1.28
USH2AO75445 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC7.07□□□□□ -1.28
USH2AO75445 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
USH2AO75445 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
USH2AO75445 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC7.07□□□□□ -1.28
USH2AO75445 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 SNX15-201ENST00000352068 771 ntTSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
USH2AO75445 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC7.07□□□□□ -1.28
USH2AO75445 AP002803.1-201ENST00000528836 498 ntBASIC7.07□□□□□ -1.28
USH2AO75445 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 IFT20-208ENST00000578985 831 ntTSL 3 BASIC7.07□□□□□ -1.28
USH2AO75445 RPL17P45-201ENST00000586289 509 ntBASIC7.07□□□□□ -1.28
USH2AO75445 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 PCDHB17P-201ENST00000539533 2393 ntBASIC7.07□□□□□ -1.28
USH2AO75445 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC7.07□□□□□ -1.28
USH2AO75445 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC7.06□□□□□ -1.28
USH2AO75445 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC7.06□□□□□ -1.28
USH2AO75445 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
USH2AO75445 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC7.06□□□□□ -1.28
USH2AO75445 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC7.06□□□□□ -1.28
USH2AO75445 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
USH2AO75445 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC7.06□□□□□ -1.28
USH2AO75445 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC7.06□□□□□ -1.28
USH2AO75445 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC7.06□□□□□ -1.28
USH2AO75445 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC7.06□□□□□ -1.28
USH2AO75445 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC7.06□□□□□ -1.28
USH2AO75445 AL023775.1-201ENST00000454907 1746 ntBASIC7.06□□□□□ -1.28
USH2AO75445 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 CES3-203ENST00000543856 3178 ntTSL 2 BASIC7.06□□□□□ -1.28
USH2AO75445 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USH2AO75445 PKIG-203ENST00000372887 769 ntTSL 3 BASIC7.06□□□□□ -1.28
USH2AO75445 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
USH2AO75445 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC7.06□□□□□ -1.28
USH2AO75445 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC7.06□□□□□ -1.28
USH2AO75445 MIR6858-201ENST00000620733 67 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms