Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE3O75131 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE3O75131 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.63■□□□□ 0.09
CPNE3O75131 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.63■□□□□ 0.09
CPNE3O75131 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CPNE3O75131 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CPNE3O75131 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.62■□□□□ 0.09
CPNE3O75131 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CPNE3O75131 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 AL353705.2-201ENST00000428243 662 ntBASIC15.62■□□□□ 0.09
CPNE3O75131 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.62■□□□□ 0.09
CPNE3O75131 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.62■□□□□ 0.09
CPNE3O75131 AC097493.3-201ENST00000509725 367 ntBASIC15.62■□□□□ 0.09
CPNE3O75131 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.62■□□□□ 0.09
CPNE3O75131 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.62■□□□□ 0.09
CPNE3O75131 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.62■□□□□ 0.09
CPNE3O75131 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.62■□□□□ 0.09
CPNE3O75131 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.62■□□□□ 0.09
CPNE3O75131 SPTSSB-204ENST00000617024 1292 ntBASIC15.62■□□□□ 0.09
CPNE3O75131 AC073592.8-201ENST00000624126 511 ntBASIC15.62■□□□□ 0.09
CPNE3O75131 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.62■□□□□ 0.09
CPNE3O75131 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.62■□□□□ 0.09
CPNE3O75131 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE3O75131 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.62■□□□□ 0.09
CPNE3O75131 SNX33P1-201ENST00000592116 1762 ntBASIC15.62■□□□□ 0.09
CPNE3O75131 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CPNE3O75131 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE3O75131 AC060834.1-201ENST00000443027 2032 ntBASIC15.61■□□□□ 0.09
CPNE3O75131 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.61■□□□□ 0.09
CPNE3O75131 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.61■□□□□ 0.09
CPNE3O75131 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.61■□□□□ 0.09
CPNE3O75131 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.61■□□□□ 0.09
CPNE3O75131 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CPNE3O75131 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.61■□□□□ 0.09
CPNE3O75131 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 FAM220BP-201ENST00000377689 816 ntBASIC15.61■□□□□ 0.09
CPNE3O75131 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.61■□□□□ 0.09
CPNE3O75131 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.61■□□□□ 0.09
CPNE3O75131 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.61■□□□□ 0.09
CPNE3O75131 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.61■□□□□ 0.09
CPNE3O75131 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.61■□□□□ 0.09
CPNE3O75131 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.61■□□□□ 0.09
CPNE3O75131 FOXO1B-201ENST00000504678 1527 ntBASIC15.61■□□□□ 0.09
CPNE3O75131 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CPNE3O75131 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CPNE3O75131 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CPNE3O75131 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE3O75131 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CPNE3O75131 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CPNE3O75131 AC106886.4-201ENST00000623557 2502 ntBASIC15.6■□□□□ 0.09
CPNE3O75131 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CPNE3O75131 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.6■□□□□ 0.09
CPNE3O75131 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CPNE3O75131 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.6■□□□□ 0.09
CPNE3O75131 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.6■□□□□ 0.09
CPNE3O75131 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms