Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTNND1O60716 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTNND1O60716 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.81■□□□□ 0.6
CTNND1O60716 RPL13P2-201ENST00000440687 659 ntBASIC18.81■□□□□ 0.6
CTNND1O60716 AC234783.1-201ENST00000441761 496 ntBASIC18.81■□□□□ 0.6
CTNND1O60716 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.81■□□□□ 0.6
CTNND1O60716 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.81■□□□□ 0.6
CTNND1O60716 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTNND1O60716 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTNND1O60716 AP005482.1-201ENST00000563722 1273 ntBASIC18.81■□□□□ 0.6
CTNND1O60716 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.81■□□□□ 0.6
CTNND1O60716 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.81■□□□□ 0.6
CTNND1O60716 MIR4259-201ENST00000584466 101 ntBASIC18.81■□□□□ 0.6
CTNND1O60716 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.81■□□□□ 0.6
CTNND1O60716 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.81■□□□□ 0.6
CTNND1O60716 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.81■□□□□ 0.6
CTNND1O60716 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 KRT8P37-201ENST00000451609 1420 ntBASIC18.81■□□□□ 0.6
CTNND1O60716 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CTNND1O60716 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.8■□□□□ 0.6
CTNND1O60716 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.8■□□□□ 0.6
CTNND1O60716 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.8■□□□□ 0.6
CTNND1O60716 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.8■□□□□ 0.6
CTNND1O60716 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.8■□□□□ 0.6
CTNND1O60716 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CTNND1O60716 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.8■□□□□ 0.6
CTNND1O60716 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 AZGP1P1-201ENST00000411909 902 ntBASIC18.8■□□□□ 0.6
CTNND1O60716 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.8■□□□□ 0.6
CTNND1O60716 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.8■□□□□ 0.6
CTNND1O60716 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.8■□□□□ 0.6
CTNND1O60716 AC119751.2-201ENST00000504529 210 ntBASIC18.8■□□□□ 0.6
CTNND1O60716 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.8■□□□□ 0.6
CTNND1O60716 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.8■□□□□ 0.6
CTNND1O60716 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.8■□□□□ 0.6
CTNND1O60716 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.8■□□□□ 0.6
CTNND1O60716 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CTNND1O60716 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CTNND1O60716 AC078925.2-201ENST00000624013 1973 ntBASIC18.8■□□□□ 0.6
CTNND1O60716 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CTNND1O60716 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.8■□□□□ 0.6
CTNND1O60716 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTNND1O60716 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CTNND1O60716 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
CTNND1O60716 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTNND1O60716 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CTNND1O60716 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CTNND1O60716 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.79■□□□□ 0.6
CTNND1O60716 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.79■□□□□ 0.6
CTNND1O60716 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.79■□□□□ 0.6
CTNND1O60716 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.79■□□□□ 0.6
CTNND1O60716 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.79■□□□□ 0.6
CTNND1O60716 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.79■□□□□ 0.6
CTNND1O60716 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.79■□□□□ 0.6
CTNND1O60716 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.79■□□□□ 0.6
CTNND1O60716 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.79■□□□□ 0.6
CTNND1O60716 AC010319.3-201ENST00000597028 470 ntBASIC18.79■□□□□ 0.6
CTNND1O60716 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CTNND1O60716 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.79■□□□□ 0.6
CTNND1O60716 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.79■□□□□ 0.6
CTNND1O60716 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CTNND1O60716 RNF216P1-203ENST00000404404 2427 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms