Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ACTN4O43707 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.17■□□□□ 0.5
ACTN4O43707 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACTN4O43707 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.17■□□□□ 0.5
ACTN4O43707 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACTN4O43707 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ACTN4O43707 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACTN4O43707 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
ACTN4O43707 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.17■□□□□ 0.5
ACTN4O43707 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACTN4O43707 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
ACTN4O43707 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACTN4O43707 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACTN4O43707 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACTN4O43707 AC134407.2-201ENST00000625089 1978 ntBASIC18.17■□□□□ 0.5
ACTN4O43707 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACTN4O43707 AC013268.4-201ENST00000637413 2228 ntBASIC18.17■□□□□ 0.5
ACTN4O43707 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.16■□□□□ 0.5
ACTN4O43707 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.16■□□□□ 0.5
ACTN4O43707 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ACTN4O43707 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.16■□□□□ 0.5
ACTN4O43707 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ACTN4O43707 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ACTN4O43707 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 AC073347.1-201ENST00000421633 2643 ntBASIC18.16■□□□□ 0.5
ACTN4O43707 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.16■□□□□ 0.5
ACTN4O43707 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ACTN4O43707 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.16■□□□□ 0.5
ACTN4O43707 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ACTN4O43707 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.16■□□□□ 0.5
ACTN4O43707 AL355306.1-201ENST00000415580 579 ntBASIC18.16■□□□□ 0.5
ACTN4O43707 ADH5P3-201ENST00000433842 1137 ntBASIC18.16■□□□□ 0.5
ACTN4O43707 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ACTN4O43707 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 AC091812.2-201ENST00000619081 385 ntBASIC18.16■□□□□ 0.5
ACTN4O43707 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ACTN4O43707 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.16■□□□□ 0.5
ACTN4O43707 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
ACTN4O43707 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.16■□□□□ 0.5
ACTN4O43707 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACTN4O43707 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.16■□□□□ 0.5
ACTN4O43707 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.15■□□□□ 0.5
ACTN4O43707 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.15■□□□□ 0.5
ACTN4O43707 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ACTN4O43707 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.15■□□□□ 0.5
ACTN4O43707 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 AP003680.1-201ENST00000598970 3660 ntBASIC18.15■□□□□ 0.5
ACTN4O43707 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.15■□□□□ 0.5
ACTN4O43707 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.15■□□□□ 0.5
ACTN4O43707 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
ACTN4O43707 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.15■□□□□ 0.5
ACTN4O43707 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.15■□□□□ 0.5
ACTN4O43707 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.15■□□□□ 0.5
ACTN4O43707 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.15■□□□□ 0.5
ACTN4O43707 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.15■□□□□ 0.5
ACTN4O43707 AC061975.2-201ENST00000581722 295 ntBASIC18.15■□□□□ 0.5
ACTN4O43707 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.15■□□□□ 0.5
ACTN4O43707 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.15■□□□□ 0.5
ACTN4O43707 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.15■□□□□ 0.5
ACTN4O43707 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACTN4O43707 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.15■□□□□ 0.5
ACTN4O43707 AC022532.1-201ENST00000624563 1728 ntBASIC18.15■□□□□ 0.5
ACTN4O43707 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.15■□□□□ 0.5
ACTN4O43707 PPT1-215ENST00000641471 2368 ntBASIC18.15■□□□□ 0.5
ACTN4O43707 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.14■□□□□ 0.5
ACTN4O43707 AP001282.1-201ENST00000531301 1499 ntBASIC18.14■□□□□ 0.5
ACTN4O43707 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.14■□□□□ 0.49
ACTN4O43707 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
ACTN4O43707 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms