Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SOX1O00570 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.99■□□□□ 0.31
SOX1O00570 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SOX1O00570 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 AZGP1P1-201ENST00000411909 902 ntBASIC16.99■□□□□ 0.31
SOX1O00570 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.99■□□□□ 0.31
SOX1O00570 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.99■□□□□ 0.31
SOX1O00570 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
SOX1O00570 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 AC022217.1-201ENST00000521069 738 ntBASIC16.99■□□□□ 0.31
SOX1O00570 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.99■□□□□ 0.31
SOX1O00570 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 AC132192.2-201ENST00000596206 1147 ntBASIC16.99■□□□□ 0.31
SOX1O00570 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.99■□□□□ 0.31
SOX1O00570 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.99■□□□□ 0.31
SOX1O00570 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.99■□□□□ 0.31
SOX1O00570 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SOX1O00570 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SOX1O00570 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.98■□□□□ 0.31
SOX1O00570 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.98■□□□□ 0.31
SOX1O00570 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.98■□□□□ 0.31
SOX1O00570 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.98■□□□□ 0.31
SOX1O00570 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.98■□□□□ 0.31
SOX1O00570 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.98■□□□□ 0.31
SOX1O00570 TARDBPP1-201ENST00000442013 1203 ntBASIC16.98■□□□□ 0.31
SOX1O00570 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.98■□□□□ 0.31
SOX1O00570 RNA5SP486-201ENST00000515961 83 ntBASIC16.98■□□□□ 0.31
SOX1O00570 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.98■□□□□ 0.31
SOX1O00570 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.98■□□□□ 0.31
SOX1O00570 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SOX1O00570 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 AL023775.1-201ENST00000454907 1746 ntBASIC16.98■□□□□ 0.31
SOX1O00570 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SOX1O00570 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 WIZP1-201ENST00000531444 2299 ntBASIC16.98■□□□□ 0.31
SOX1O00570 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SOX1O00570 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SOX1O00570 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
SOX1O00570 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SOX1O00570 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SOX1O00570 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.97■□□□□ 0.31
SOX1O00570 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SOX1O00570 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SOX1O00570 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.97■□□□□ 0.31
SOX1O00570 TOMM22P5-201ENST00000416399 439 ntBASIC16.97■□□□□ 0.31
SOX1O00570 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.97■□□□□ 0.31
SOX1O00570 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SOX1O00570 NOC2LP1-201ENST00000450578 752 ntBASIC16.97■□□□□ 0.31
SOX1O00570 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.97■□□□□ 0.31
SOX1O00570 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
SOX1O00570 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SOX1O00570 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.97■□□□□ 0.31
SOX1O00570 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SOX1O00570 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms