Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.03□□□□□ -0.32
UPK2O00526 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UPK2O00526 AC025580.3-201ENST00000617932 1424 ntBASIC13.03□□□□□ -0.32
UPK2O00526 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.02□□□□□ -0.32
UPK2O00526 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK2O00526 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
UPK2O00526 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.02□□□□□ -0.32
UPK2O00526 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK2O00526 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK2O00526 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.02□□□□□ -0.32
UPK2O00526 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.02□□□□□ -0.32
UPK2O00526 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK2O00526 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UPK2O00526 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
UPK2O00526 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
UPK2O00526 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
UPK2O00526 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
UPK2O00526 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
UPK2O00526 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.02□□□□□ -0.33
UPK2O00526 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.02□□□□□ -0.33
UPK2O00526 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.02□□□□□ -0.33
UPK2O00526 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.02□□□□□ -0.33
UPK2O00526 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.02□□□□□ -0.33
UPK2O00526 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.02□□□□□ -0.33
UPK2O00526 AC002347.1-201ENST00000569543 541 ntBASIC13.02□□□□□ -0.33
UPK2O00526 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.02□□□□□ -0.33
UPK2O00526 AC004877.2-201ENST00000623941 599 ntBASIC13.02□□□□□ -0.33
UPK2O00526 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.02□□□□□ -0.33
UPK2O00526 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 BCAR1-209ENST00000546196 1340 ntBASIC13.02□□□□□ -0.33
UPK2O00526 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.02□□□□□ -0.33
UPK2O00526 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 AL589702.1-201ENST00000641229 1509 ntBASIC13.02□□□□□ -0.33
UPK2O00526 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
UPK2O00526 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK2O00526 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
UPK2O00526 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
UPK2O00526 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
UPK2O00526 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.01□□□□□ -0.33
UPK2O00526 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK2O00526 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK2O00526 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK2O00526 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UPK2O00526 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK2O00526 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UPK2O00526 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UPK2O00526 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK2O00526 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK2O00526 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK2O00526 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK2O00526 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.01□□□□□ -0.33
UPK2O00526 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UPK2O00526 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.01□□□□□ -0.33
UPK2O00526 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
UPK2O00526 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.01□□□□□ -0.33
UPK2O00526 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.01□□□□□ -0.33
UPK2O00526 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK2O00526 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.01□□□□□ -0.33
UPK2O00526 SLC25A6P4-201ENST00000586535 553 ntBASIC13.01□□□□□ -0.33
UPK2O00526 MIR4321-201ENST00000592276 80 ntBASIC13.01□□□□□ -0.33
UPK2O00526 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK2O00526 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK2O00526 AL161645.1-201ENST00000622716 1255 ntBASIC13.01□□□□□ -0.33
UPK2O00526 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms