Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PIK3C2AO00443 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.3■■□□□ 1
PIK3C2AO00443 AC022211.2-201ENST00000585075 2527 ntBASIC21.3■■□□□ 1
PIK3C2AO00443 AC011676.5-201ENST00000624864 2660 ntBASIC21.3■■□□□ 1
PIK3C2AO00443 AGGF1P2-201ENST00000426656 2106 ntBASIC21.3■■□□□ 1
PIK3C2AO00443 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.3■■□□□ 1
PIK3C2AO00443 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PIK3C2AO00443 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
PIK3C2AO00443 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.29■■□□□ 1
PIK3C2AO00443 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PIK3C2AO00443 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
PIK3C2AO00443 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC21.29■■□□□ 1
PIK3C2AO00443 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.29■■□□□ 1
PIK3C2AO00443 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.29■■□□□ 1
PIK3C2AO00443 AC025279.2-201ENST00000569730 653 ntBASIC21.29■■□□□ 1
PIK3C2AO00443 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.29■■□□□ 1
PIK3C2AO00443 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.29■■□□□ 1
PIK3C2AO00443 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.29■■□□□ 1
PIK3C2AO00443 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
PIK3C2AO00443 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PIK3C2AO00443 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PIK3C2AO00443 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PIK3C2AO00443 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PIK3C2AO00443 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.28■■□□□ 1
PIK3C2AO00443 YBX1P6-201ENST00000442962 1002 ntBASIC21.28■■□□□ 1
PIK3C2AO00443 AC009486.1-201ENST00000569860 813 ntBASIC21.28■■□□□ 1
PIK3C2AO00443 RN7SL560P-201ENST00000577943 264 ntBASIC21.28■■□□□ 1
PIK3C2AO00443 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.28■■□□□ 1
PIK3C2AO00443 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.28■■□□□ 1
PIK3C2AO00443 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.28■■□□□ 1
PIK3C2AO00443 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.28■■□□□ 1
PIK3C2AO00443 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.28■■□□□ 1
PIK3C2AO00443 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21.28■■□□□ 1
PIK3C2AO00443 GAPDHP40-201ENST00000505218 1006 ntBASIC21.28■■□□□ 1
PIK3C2AO00443 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.28■■□□□ 1
PIK3C2AO00443 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.28■■□□□ 1
PIK3C2AO00443 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.28■■□□□ 1
PIK3C2AO00443 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.28■■□□□ 1
PIK3C2AO00443 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.27■■□□□ 1
PIK3C2AO00443 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21.27■■□□□ 1
PIK3C2AO00443 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PIK3C2AO00443 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.27■■□□□ 1
PIK3C2AO00443 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PIK3C2AO00443 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.27■■□□□ 1
PIK3C2AO00443 MIR648-201ENST00000385046 94 ntBASIC21.27■■□□□ 1
PIK3C2AO00443 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
PIK3C2AO00443 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.27■■□□□ 1
PIK3C2AO00443 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.27■■□□□ 1
PIK3C2AO00443 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.27■■□□□ 1
PIK3C2AO00443 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.27■■□□□ 1
PIK3C2AO00443 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.27■■□□□ 1
PIK3C2AO00443 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC21.27■■□□□ 1
PIK3C2AO00443 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PIK3C2AO00443 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PIK3C2AO00443 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PIK3C2AO00443 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PIK3C2AO00443 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PIK3C2AO00443 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.26■□□□□ 0.99
PIK3C2AO00443 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PIK3C2AO00443 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PIK3C2AO00443 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC21.26■□□□□ 0.99
PIK3C2AO00443 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.26■□□□□ 0.99
PIK3C2AO00443 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms