Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FOXN3O00409 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXN3O00409 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FOXN3O00409 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXN3O00409 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
FOXN3O00409 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
FOXN3O00409 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXN3O00409 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXN3O00409 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXN3O00409 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FOXN3O00409 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXN3O00409 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
FOXN3O00409 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXN3O00409 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXN3O00409 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
FOXN3O00409 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.34■□□□□ 0.37
FOXN3O00409 MKNK2P1-201ENST00000437526 628 ntBASIC17.34■□□□□ 0.37
FOXN3O00409 ACTG1P14-201ENST00000446382 1122 ntBASIC17.34■□□□□ 0.37
FOXN3O00409 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 RN7SL589P-201ENST00000481268 310 ntBASIC17.34■□□□□ 0.37
FOXN3O00409 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.34■□□□□ 0.37
FOXN3O00409 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 AP000842.3-202ENST00000569238 1080 ntBASIC17.34■□□□□ 0.37
FOXN3O00409 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.34■□□□□ 0.37
FOXN3O00409 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 AC134407.2-201ENST00000625089 1978 ntBASIC17.34■□□□□ 0.37
FOXN3O00409 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
FOXN3O00409 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXN3O00409 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXN3O00409 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.33■□□□□ 0.37
FOXN3O00409 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXN3O00409 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
FOXN3O00409 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXN3O00409 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXN3O00409 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.33■□□□□ 0.37
FOXN3O00409 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FOXN3O00409 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXN3O00409 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXN3O00409 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FOXN3O00409 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXN3O00409 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
FOXN3O00409 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FOXN3O00409 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXN3O00409 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXN3O00409 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.33■□□□□ 0.36
FOXN3O00409 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FOXN3O00409 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXN3O00409 TIMM8BP1-201ENST00000452384 211 ntBASIC17.33■□□□□ 0.36
FOXN3O00409 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXN3O00409 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.33■□□□□ 0.36
FOXN3O00409 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXN3O00409 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXN3O00409 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.33■□□□□ 0.36
FOXN3O00409 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
FOXN3O00409 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
FOXN3O00409 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.33■□□□□ 0.36
FOXN3O00409 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXN3O00409 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXN3O00409 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXN3O00409 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXN3O00409 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXN3O00409 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXN3O00409 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXN3O00409 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXN3O00409 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FOXN3O00409 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
FOXN3O00409 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FOXN3O00409 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXN3O00409 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXN3O00409 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.32■□□□□ 0.36
FOXN3O00409 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXN3O00409 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXN3O00409 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXN3O00409 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXN3O00409 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXN3O00409 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXN3O00409 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms