Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK1AO00322 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 MIR574-201ENST00000385209 96 ntBASIC15.38■□□□□ 0.05
UPK1AO00322 MIR940-201ENST00000401276 94 ntBASIC15.38■□□□□ 0.05
UPK1AO00322 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK1AO00322 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK1AO00322 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK1AO00322 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 AL078644.1-201ENST00000609881 752 ntBASIC15.38■□□□□ 0.05
UPK1AO00322 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK1AO00322 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK1AO00322 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UPK1AO00322 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1AO00322 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
UPK1AO00322 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.37■□□□□ 0.05
UPK1AO00322 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.37■□□□□ 0.05
UPK1AO00322 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
UPK1AO00322 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
UPK1AO00322 AC136621.1-201ENST00000624017 2304 ntBASIC15.37■□□□□ 0.05
UPK1AO00322 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.37■□□□□ 0.05
UPK1AO00322 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UPK1AO00322 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 AC023274.1-201ENST00000418278 595 ntBASIC15.37■□□□□ 0.05
UPK1AO00322 KRT18P34-201ENST00000488218 1270 ntBASIC15.37■□□□□ 0.05
UPK1AO00322 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.37■□□□□ 0.05
UPK1AO00322 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
UPK1AO00322 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.37■□□□□ 0.05
UPK1AO00322 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.37■□□□□ 0.05
UPK1AO00322 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.37■□□□□ 0.05
UPK1AO00322 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
UPK1AO00322 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
UPK1AO00322 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
UPK1AO00322 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
UPK1AO00322 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.37■□□□□ 0.05
UPK1AO00322 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK1AO00322 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.36■□□□□ 0.05
UPK1AO00322 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.36■□□□□ 0.05
UPK1AO00322 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
UPK1AO00322 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.36■□□□□ 0.05
UPK1AO00322 AC002056.1-201ENST00000395613 760 ntBASIC15.36■□□□□ 0.05
UPK1AO00322 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.36■□□□□ 0.05
UPK1AO00322 KRT18P58-201ENST00000527480 1120 ntBASIC15.36■□□□□ 0.05
UPK1AO00322 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.36■□□□□ 0.05
UPK1AO00322 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 AL161645.1-201ENST00000622716 1255 ntBASIC15.36■□□□□ 0.05
UPK1AO00322 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms