Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.31■□□□□ 0.04
CLIC1O00299 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.31■□□□□ 0.04
CLIC1O00299 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.31■□□□□ 0.04
CLIC1O00299 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC1O00299 KRT18P34-201ENST00000488218 1270 ntBASIC15.31■□□□□ 0.04
CLIC1O00299 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CLIC1O00299 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
CLIC1O00299 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.31■□□□□ 0.04
CLIC1O00299 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.31■□□□□ 0.04
CLIC1O00299 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 AL365330.1-201ENST00000607459 531 ntBASIC15.31■□□□□ 0.04
CLIC1O00299 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.31■□□□□ 0.04
CLIC1O00299 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC1O00299 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CLIC1O00299 SSR4P1-203ENST00000599569 2260 ntBASIC15.31■□□□□ 0.04
CLIC1O00299 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 FLJ16779-201ENST00000612722 7638 ntBASIC15.31■□□□□ 0.04
CLIC1O00299 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 AC023824.1-201ENST00000562945 2975 ntBASIC15.3■□□□□ 0.04
CLIC1O00299 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLIC1O00299 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.3■□□□□ 0.04
CLIC1O00299 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 CRYGEP-201ENST00000412192 528 ntBASIC15.3■□□□□ 0.04
CLIC1O00299 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.3■□□□□ 0.04
CLIC1O00299 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.3■□□□□ 0.04
CLIC1O00299 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.3■□□□□ 0.04
CLIC1O00299 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 AC109635.5-201ENST00000533593 962 ntBASIC15.3■□□□□ 0.04
CLIC1O00299 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLIC1O00299 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 AL009183.1-201ENST00000603760 355 ntBASIC15.3■□□□□ 0.04
CLIC1O00299 AC092850.2-201ENST00000623821 2697 ntBASIC15.3■□□□□ 0.04
CLIC1O00299 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.3■□□□□ 0.04
CLIC1O00299 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC1O00299 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC1O00299 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC1O00299 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLIC1O00299 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC1O00299 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC1O00299 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.29■□□□□ 0.04
CLIC1O00299 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC1O00299 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
CLIC1O00299 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC1O00299 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC1O00299 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC1O00299 AC020658.6-201ENST00000623564 1870 ntBASIC15.29■□□□□ 0.04
CLIC1O00299 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC1O00299 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.29■□□□□ 0.04
CLIC1O00299 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.29■□□□□ 0.04
CLIC1O00299 AP002414.2-201ENST00000591780 3365 ntBASIC15.29■□□□□ 0.04
CLIC1O00299 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms