Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.04■□□□□ 0.16
TLR4O00206 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
TLR4O00206 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.04■□□□□ 0.16
TLR4O00206 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TLR4O00206 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.04■□□□□ 0.16
TLR4O00206 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TLR4O00206 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.04■□□□□ 0.16
TLR4O00206 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TLR4O00206 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 SPDYE19P-201ENST00000338590 713 ntBASIC16.04■□□□□ 0.16
TLR4O00206 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.04■□□□□ 0.16
TLR4O00206 AC098614.1-201ENST00000368528 745 ntBASIC16.04■□□□□ 0.16
TLR4O00206 SPDYE17-201ENST00000412399 783 ntBASIC16.04■□□□□ 0.16
TLR4O00206 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.04■□□□□ 0.16
TLR4O00206 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.04■□□□□ 0.16
TLR4O00206 AL033527.5-202ENST00000641632 1098 ntBASIC16.04■□□□□ 0.16
TLR4O00206 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.04■□□□□ 0.16
TLR4O00206 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TLR4O00206 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.04■□□□□ 0.16
TLR4O00206 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.04■□□□□ 0.16
TLR4O00206 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TLR4O00206 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TLR4O00206 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 AC138969.3-201ENST00000546612 1459 ntBASIC16.03■□□□□ 0.16
TLR4O00206 AC138932.2-201ENST00000548268 1459 ntBASIC16.03■□□□□ 0.16
TLR4O00206 AC126755.4-201ENST00000549796 1459 ntBASIC16.03■□□□□ 0.16
TLR4O00206 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.03■□□□□ 0.16
TLR4O00206 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TLR4O00206 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.03■□□□□ 0.16
TLR4O00206 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.03■□□□□ 0.16
TLR4O00206 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TLR4O00206 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.03■□□□□ 0.16
TLR4O00206 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
TLR4O00206 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TLR4O00206 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.03■□□□□ 0.16
TLR4O00206 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TLR4O00206 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.03■□□□□ 0.16
TLR4O00206 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.03■□□□□ 0.16
TLR4O00206 AL008721.1-201ENST00000609964 604 ntBASIC16.03■□□□□ 0.16
TLR4O00206 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.03■□□□□ 0.16
TLR4O00206 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.03■□□□□ 0.16
TLR4O00206 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TLR4O00206 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TLR4O00206 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.03■□□□□ 0.16
TLR4O00206 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TLR4O00206 FLJ38576-201ENST00000623820 2459 ntBASIC16.03■□□□□ 0.16
TLR4O00206 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TLR4O00206 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TLR4O00206 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TLR4O00206 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.02■□□□□ 0.16
TLR4O00206 GGT4P-201ENST00000623672 1708 ntBASIC16.02■□□□□ 0.16
TLR4O00206 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TLR4O00206 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.02■□□□□ 0.16
TLR4O00206 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TLR4O00206 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms