Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 AC004987.2-201ENST00000395959 1148 ntBASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 HMGN1P19-201ENST00000436976 333 ntBASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 AC093214.1-201ENST00000511688 1107 ntBASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 AC243562.2-201ENST00000561247 970 ntBASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 AL590560.3-201ENST00000623350 461 ntBASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 KRT8P12-202ENST00000472924 1397 ntBASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 AC100757.3-201ENST00000622361 1406 ntBASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 DOC2GP-204ENST00000639052 2548 ntBASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
YJEFN3A6XGL0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
YJEFN3A6XGL0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
YJEFN3A6XGL0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
YJEFN3A6XGL0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
YJEFN3A6XGL0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 TSSK5P-201ENST00000423978 907 ntBASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 AP001282.1-201ENST00000531301 1499 ntBASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 AL391005.1-201ENST00000623953 2435 ntBASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.83■□□□□ 0.28
YJEFN3A6XGL0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 AC241585.1-201ENST00000433527 519 ntBASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 AC024909.3-201ENST00000611513 2257 ntBASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
YJEFN3A6XGL0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms