Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 AC105233.2-201ENST00000523697 349 ntBASIC13.39□□□□□ -0.27
A0A1W2PRF3 AF228730.5-201ENST00000530288 346 ntBASIC13.39□□□□□ -0.27
A0A1W2PRF3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.39□□□□□ -0.27
A0A1W2PRF3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
A0A1W2PRF3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AL161772.1-201ENST00000610494 4412 ntBASIC13.38□□□□□ -0.27
A0A1W2PRF3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AC008677.1-201ENST00000519230 1561 ntBASIC13.38□□□□□ -0.27
A0A1W2PRF3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 SPDYE14P-201ENST00000442619 822 ntBASIC13.38□□□□□ -0.27
A0A1W2PRF3 CYMP-203ENST00000474680 1263 ntBASIC13.38□□□□□ -0.27
A0A1W2PRF3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 RNA5SP410-201ENST00000516285 106 ntBASIC13.38□□□□□ -0.27
A0A1W2PRF3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AC020765.3-201ENST00000613051 740 ntBASIC13.38□□□□□ -0.27
A0A1W2PRF3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.38□□□□□ -0.27
A0A1W2PRF3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
A0A1W2PRF3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
A0A1W2PRF3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 TSPY26P-202ENST00000565928 3884 ntBASIC13.37□□□□□ -0.27
A0A1W2PRF3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms