Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM5Q9Y4Y9 CLDN5-201ENST00000403084 2357 ntBASIC19.34■□□□□ 0.69
LSM5Q9Y4Y9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.34■□□□□ 0.69
LSM5Q9Y4Y9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.34■□□□□ 0.69
LSM5Q9Y4Y9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.34■□□□□ 0.69
LSM5Q9Y4Y9 DUX4L28-201ENST00000623687 678 ntBASIC19.34■□□□□ 0.69
LSM5Q9Y4Y9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LSM5Q9Y4Y9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM5Q9Y4Y9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSM5Q9Y4Y9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSM5Q9Y4Y9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM5Q9Y4Y9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM5Q9Y4Y9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM5Q9Y4Y9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM5Q9Y4Y9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM5Q9Y4Y9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM5Q9Y4Y9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM5Q9Y4Y9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSM5Q9Y4Y9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
LSM5Q9Y4Y9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LSM5Q9Y4Y9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM5Q9Y4Y9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM5Q9Y4Y9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM5Q9Y4Y9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 AC004812.2-201ENST00000611079 2094 ntBASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 C9orf163-202ENST00000624034 2573 ntBASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM5Q9Y4Y9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM5Q9Y4Y9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM5Q9Y4Y9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM5Q9Y4Y9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM5Q9Y4Y9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.27■□□□□ 0.68
LSM5Q9Y4Y9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM5Q9Y4Y9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM5Q9Y4Y9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
LSM5Q9Y4Y9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LSM5Q9Y4Y9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.26■□□□□ 0.67
LSM5Q9Y4Y9 ABCB10P4-201ENST00000566803 2184 ntBASIC19.26■□□□□ 0.67
LSM5Q9Y4Y9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM5Q9Y4Y9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms