Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 LONRF2P2-201ENST00000439212 571 ntBASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 AC103724.3-201ENST00000564481 992 ntBASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
KDM3AQ9Y4C1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.65■■□□□ 1.86
KDM3AQ9Y4C1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KDM3AQ9Y4C1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
KDM3AQ9Y4C1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KDM3AQ9Y4C1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
KDM3AQ9Y4C1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.65■■□□□ 1.86
KDM3AQ9Y4C1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.65■■□□□ 1.86
KDM3AQ9Y4C1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
KDM3AQ9Y4C1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
KDM3AQ9Y4C1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
KDM3AQ9Y4C1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
KDM3AQ9Y4C1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.64■■□□□ 1.86
KDM3AQ9Y4C1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
KDM3AQ9Y4C1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
KDM3AQ9Y4C1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KDM3AQ9Y4C1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.63■■□□□ 1.85
KDM3AQ9Y4C1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
KDM3AQ9Y4C1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
KDM3AQ9Y4C1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
KDM3AQ9Y4C1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KDM3AQ9Y4C1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KDM3AQ9Y4C1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KDM3AQ9Y4C1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
KDM3AQ9Y4C1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
KDM3AQ9Y4C1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.62■■□□□ 1.85
KDM3AQ9Y4C1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 AL031848.2-201ENST00000607670 837 ntBASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
KDM3AQ9Y4C1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
KDM3AQ9Y4C1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
KDM3AQ9Y4C1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
KDM3AQ9Y4C1 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.6■■□□□ 1.85
KDM3AQ9Y4C1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.6■■□□□ 1.85
KDM3AQ9Y4C1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.6■■□□□ 1.85
KDM3AQ9Y4C1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KDM3AQ9Y4C1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.59■■□□□ 1.85
KDM3AQ9Y4C1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KDM3AQ9Y4C1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
KDM3AQ9Y4C1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KDM3AQ9Y4C1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KDM3AQ9Y4C1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.59■■□□□ 1.85
KDM3AQ9Y4C1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
KDM3AQ9Y4C1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
KDM3AQ9Y4C1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
KDM3AQ9Y4C1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.58■■□□□ 1.85
KDM3AQ9Y4C1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.58■■□□□ 1.85
KDM3AQ9Y4C1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.58■■□□□ 1.84
KDM3AQ9Y4C1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
KDM3AQ9Y4C1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KDM3AQ9Y4C1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
KDM3AQ9Y4C1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
KDM3AQ9Y4C1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KDM3AQ9Y4C1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.56■■□□□ 1.84
KDM3AQ9Y4C1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.56■■□□□ 1.84
KDM3AQ9Y4C1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.56■■□□□ 1.84
KDM3AQ9Y4C1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KDM3AQ9Y4C1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
KDM3AQ9Y4C1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KDM3AQ9Y4C1 SLC6A10P-202ENST00000431994 2058 ntBASIC26.55■■□□□ 1.84
KDM3AQ9Y4C1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KDM3AQ9Y4C1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KDM3AQ9Y4C1 GUSBP5-201ENST00000418136 578 ntBASIC26.54■■□□□ 1.84
KDM3AQ9Y4C1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.54■■□□□ 1.84
KDM3AQ9Y4C1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.54■■□□□ 1.84
KDM3AQ9Y4C1 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.54■■□□□ 1.84
KDM3AQ9Y4C1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KDM3AQ9Y4C1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
KDM3AQ9Y4C1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KDM3AQ9Y4C1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KDM3AQ9Y4C1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
KDM3AQ9Y4C1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KDM3AQ9Y4C1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
KDM3AQ9Y4C1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KDM3AQ9Y4C1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KDM3AQ9Y4C1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KDM3AQ9Y4C1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms