Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 DUSP8P3-201ENST00000399571 1760 ntBASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 AC073130.3-201ENST00000624389 2278 ntBASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC42SE1Q9NRR8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CDC42SE1Q9NRR8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC12.28□□□□□ -0.44
CDC42SE1Q9NRR8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CDC42SE1Q9NRR8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CDC42SE1Q9NRR8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CDC42SE1Q9NRR8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CDC42SE1Q9NRR8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC12.27□□□□□ -0.44
CDC42SE1Q9NRR8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 LINC01124-201ENST00000409786 2117 ntBASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC42SE1Q9NRR8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 WHAMMP2-203ENST00000563942 1603 ntBASIC12.26□□□□□ -0.45
CDC42SE1Q9NRR8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.25□□□□□ -0.45
CDC42SE1Q9NRR8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC42SE1Q9NRR8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC42SE1Q9NRR8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC42SE1Q9NRR8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC42SE1Q9NRR8 AC127496.7-201ENST00000625110 1798 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms