Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.25■□□□□ 0.83
C12orf4Q9NQ89 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
C12orf4Q9NQ89 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
C12orf4Q9NQ89 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C12orf4Q9NQ89 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C12orf4Q9NQ89 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
C12orf4Q9NQ89 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
C12orf4Q9NQ89 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C12orf4Q9NQ89 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C12orf4Q9NQ89 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
C12orf4Q9NQ89 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.24■□□□□ 0.83
C12orf4Q9NQ89 AC068473.5-201ENST00000616428 2072 ntBASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 HLA-V-202ENST00000446817 847 ntBASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf4Q9NQ89 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 SLC25A24-204ENST00000569674 2357 ntBASIC20.22■□□□□ 0.83
C12orf4Q9NQ89 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 AC138932.3-201ENST00000567634 1902 ntBASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
C12orf4Q9NQ89 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf4Q9NQ89 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf4Q9NQ89 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
C12orf4Q9NQ89 AC126177.7-201ENST00000547904 679 ntBASIC20.2■□□□□ 0.82
C12orf4Q9NQ89 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.2■□□□□ 0.82
C12orf4Q9NQ89 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf4Q9NQ89 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
C12orf4Q9NQ89 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf4Q9NQ89 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf4Q9NQ89 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf4Q9NQ89 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf4Q9NQ89 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf4Q9NQ89 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
C12orf4Q9NQ89 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 AL121603.2-201ENST00000557373 2117 ntBASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf4Q9NQ89 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf4Q9NQ89 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf4Q9NQ89 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf4Q9NQ89 ZNRF2P2-203ENST00000454624 420 ntBASIC20.17■□□□□ 0.82
C12orf4Q9NQ89 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf4Q9NQ89 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.17■□□□□ 0.82
C12orf4Q9NQ89 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf4Q9NQ89 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.16■□□□□ 0.82
C12orf4Q9NQ89 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C12orf4Q9NQ89 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C12orf4Q9NQ89 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms