Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSL2Q9HCI7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSL2Q9HCI7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.22■□□□□ 0.83
MSL2Q9HCI7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSL2Q9HCI7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.22■□□□□ 0.83
MSL2Q9HCI7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.22■□□□□ 0.83
MSL2Q9HCI7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.22■□□□□ 0.83
MSL2Q9HCI7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MSL2Q9HCI7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSL2Q9HCI7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MSL2Q9HCI7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
MSL2Q9HCI7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSL2Q9HCI7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSL2Q9HCI7 AC019171.1-201ENST00000601251 1056 ntBASIC20.2■□□□□ 0.82
MSL2Q9HCI7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSL2Q9HCI7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSL2Q9HCI7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 FOXO3B-201ENST00000395675 1928 ntBASIC20.19■□□□□ 0.82
MSL2Q9HCI7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
MSL2Q9HCI7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.18■□□□□ 0.82
MSL2Q9HCI7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.18■□□□□ 0.82
MSL2Q9HCI7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSL2Q9HCI7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSL2Q9HCI7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.17■□□□□ 0.82
MSL2Q9HCI7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.17■□□□□ 0.82
MSL2Q9HCI7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSL2Q9HCI7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSL2Q9HCI7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSL2Q9HCI7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MSL2Q9HCI7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSL2Q9HCI7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSL2Q9HCI7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.17■□□□□ 0.82
MSL2Q9HCI7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSL2Q9HCI7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MSL2Q9HCI7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.16■□□□□ 0.82
MSL2Q9HCI7 YBX1P4-201ENST00000392794 808 ntBASIC20.16■□□□□ 0.82
MSL2Q9HCI7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MSL2Q9HCI7 RARRES2P1-201ENST00000474487 481 ntBASIC20.16■□□□□ 0.82
MSL2Q9HCI7 AC103834.1-201ENST00000520383 144 ntBASIC20.16■□□□□ 0.82
MSL2Q9HCI7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
MSL2Q9HCI7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.16■□□□□ 0.82
MSL2Q9HCI7 SLC6A10P-202ENST00000431994 2058 ntBASIC20.15■□□□□ 0.82
MSL2Q9HCI7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSL2Q9HCI7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSL2Q9HCI7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSL2Q9HCI7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSL2Q9HCI7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.15■□□□□ 0.82
MSL2Q9HCI7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MSL2Q9HCI7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MSL2Q9HCI7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSL2Q9HCI7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSL2Q9HCI7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MSL2Q9HCI7 AL592295.1-201ENST00000400984 884 ntBASIC20.14■□□□□ 0.81
MSL2Q9HCI7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.14■□□□□ 0.81
MSL2Q9HCI7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MSL2Q9HCI7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSL2Q9HCI7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MSL2Q9HCI7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MSL2Q9HCI7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.13■□□□□ 0.81
MSL2Q9HCI7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.13■□□□□ 0.81
MSL2Q9HCI7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.13■□□□□ 0.81
MSL2Q9HCI7 MIR4508-201ENST00000584178 70 ntBASIC20.13■□□□□ 0.81
MSL2Q9HCI7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
MSL2Q9HCI7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSL2Q9HCI7 AC020928.2-201ENST00000588717 2197 ntBASIC20.12■□□□□ 0.81
MSL2Q9HCI7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.12■□□□□ 0.81
MSL2Q9HCI7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
MSL2Q9HCI7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MSL2Q9HCI7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSL2Q9HCI7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSL2Q9HCI7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MSL2Q9HCI7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSL2Q9HCI7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MSL2Q9HCI7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
MSL2Q9HCI7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSL2Q9HCI7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.11■□□□□ 0.81
MSL2Q9HCI7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSL2Q9HCI7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSL2Q9HCI7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms