Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ATP13A3Q9H7F0 FOXO3B-201ENST00000395675 1928 ntBASIC23.9■■□□□ 1.42
ATP13A3Q9H7F0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.9■■□□□ 1.42
ATP13A3Q9H7F0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
ATP13A3Q9H7F0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
ATP13A3Q9H7F0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ATP13A3Q9H7F0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ATP13A3Q9H7F0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ATP13A3Q9H7F0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.89■■□□□ 1.41
ATP13A3Q9H7F0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP13A3Q9H7F0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.88■■□□□ 1.41
ATP13A3Q9H7F0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP13A3Q9H7F0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP13A3Q9H7F0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ATP13A3Q9H7F0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP13A3Q9H7F0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP13A3Q9H7F0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP13A3Q9H7F0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
ATP13A3Q9H7F0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ATP13A3Q9H7F0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP13A3Q9H7F0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP13A3Q9H7F0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ATP13A3Q9H7F0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
ATP13A3Q9H7F0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
ATP13A3Q9H7F0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ATP13A3Q9H7F0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.86■■□□□ 1.41
ATP13A3Q9H7F0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.86■■□□□ 1.41
ATP13A3Q9H7F0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
ATP13A3Q9H7F0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.85■■□□□ 1.41
ATP13A3Q9H7F0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.85■■□□□ 1.41
ATP13A3Q9H7F0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.85■■□□□ 1.41
ATP13A3Q9H7F0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.85■■□□□ 1.41
ATP13A3Q9H7F0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.84■■□□□ 1.41
ATP13A3Q9H7F0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ATP13A3Q9H7F0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ATP13A3Q9H7F0 AC103724.3-201ENST00000564481 992 ntBASIC23.84■■□□□ 1.41
ATP13A3Q9H7F0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
ATP13A3Q9H7F0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ATP13A3Q9H7F0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ATP13A3Q9H7F0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ATP13A3Q9H7F0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
ATP13A3Q9H7F0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.83■■□□□ 1.41
ATP13A3Q9H7F0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP13A3Q9H7F0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP13A3Q9H7F0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP13A3Q9H7F0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.82■■□□□ 1.4
ATP13A3Q9H7F0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP13A3Q9H7F0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP13A3Q9H7F0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
ATP13A3Q9H7F0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP13A3Q9H7F0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP13A3Q9H7F0 AL031848.2-201ENST00000607670 837 ntBASIC23.81■■□□□ 1.4
ATP13A3Q9H7F0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.81■■□□□ 1.4
ATP13A3Q9H7F0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.81■■□□□ 1.4
ATP13A3Q9H7F0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.81■■□□□ 1.4
ATP13A3Q9H7F0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP13A3Q9H7F0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.8■■□□□ 1.4
ATP13A3Q9H7F0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP13A3Q9H7F0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATP13A3Q9H7F0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.8■■□□□ 1.4
ATP13A3Q9H7F0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP13A3Q9H7F0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
ATP13A3Q9H7F0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATP13A3Q9H7F0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP13A3Q9H7F0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP13A3Q9H7F0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP13A3Q9H7F0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.79■■□□□ 1.4
ATP13A3Q9H7F0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ATP13A3Q9H7F0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP13A3Q9H7F0 KRT18P24-201ENST00000344739 1156 ntBASIC23.78■■□□□ 1.4
ATP13A3Q9H7F0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP13A3Q9H7F0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATP13A3Q9H7F0 THA1P-201ENST00000590384 1145 ntBASIC23.78■■□□□ 1.4
ATP13A3Q9H7F0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
ATP13A3Q9H7F0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.78■■□□□ 1.4
ATP13A3Q9H7F0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP13A3Q9H7F0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP13A3Q9H7F0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.77■■□□□ 1.4
ATP13A3Q9H7F0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ATP13A3Q9H7F0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ATP13A3Q9H7F0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ATP13A3Q9H7F0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ATP13A3Q9H7F0 SLC6A10P-202ENST00000431994 2058 ntBASIC23.76■■□□□ 1.39
ATP13A3Q9H7F0 AC120024.1-201ENST00000562672 995 ntBASIC23.76■■□□□ 1.39
ATP13A3Q9H7F0 AC011551.1-201ENST00000614101 683 ntBASIC23.76■■□□□ 1.39
ATP13A3Q9H7F0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.76■■□□□ 1.39
ATP13A3Q9H7F0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ATP13A3Q9H7F0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
ATP13A3Q9H7F0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ATP13A3Q9H7F0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ATP13A3Q9H7F0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
ATP13A3Q9H7F0 AL451085.2-201ENST00000605085 799 ntBASIC23.75■■□□□ 1.39
ATP13A3Q9H7F0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ATP13A3Q9H7F0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ATP13A3Q9H7F0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.75■■□□□ 1.39
ATP13A3Q9H7F0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
ATP13A3Q9H7F0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.74■■□□□ 1.39
ATP13A3Q9H7F0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
ATP13A3Q9H7F0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ATP13A3Q9H7F0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms