Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS11Q9H270 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS11Q9H270 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS11Q9H270 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS11Q9H270 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS11Q9H270 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS11Q9H270 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VPS11Q9H270 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS11Q9H270 AL157400.5-201ENST00000507624 621 ntBASIC23.65■■□□□ 1.38
VPS11Q9H270 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS11Q9H270 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS11Q9H270 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS11Q9H270 AC141586.4-201ENST00000624558 1573 ntBASIC23.65■■□□□ 1.38
VPS11Q9H270 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS11Q9H270 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
VPS11Q9H270 AC068473.5-201ENST00000616428 2072 ntBASIC23.64■■□□□ 1.37
VPS11Q9H270 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
VPS11Q9H270 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
VPS11Q9H270 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS11Q9H270 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
VPS11Q9H270 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS11Q9H270 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS11Q9H270 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS11Q9H270 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.63■■□□□ 1.37
VPS11Q9H270 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS11Q9H270 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS11Q9H270 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
VPS11Q9H270 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
VPS11Q9H270 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.62■■□□□ 1.37
VPS11Q9H270 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS11Q9H270 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS11Q9H270 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS11Q9H270 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS11Q9H270 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS11Q9H270 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS11Q9H270 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS11Q9H270 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS11Q9H270 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
VPS11Q9H270 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
VPS11Q9H270 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.61■■□□□ 1.37
VPS11Q9H270 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.61■■□□□ 1.37
VPS11Q9H270 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS11Q9H270 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS11Q9H270 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS11Q9H270 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.61■■□□□ 1.37
VPS11Q9H270 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS11Q9H270 AC025884.2-201ENST00000553429 711 ntBASIC23.6■■□□□ 1.37
VPS11Q9H270 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.6■■□□□ 1.37
VPS11Q9H270 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 AC060814.1-201ENST00000554326 538 ntBASIC23.59■■□□□ 1.37
VPS11Q9H270 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
VPS11Q9H270 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS11Q9H270 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.59■■□□□ 1.37
VPS11Q9H270 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
VPS11Q9H270 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
VPS11Q9H270 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
VPS11Q9H270 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.58■■□□□ 1.37
VPS11Q9H270 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS11Q9H270 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
VPS11Q9H270 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.58■■□□□ 1.36
VPS11Q9H270 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
VPS11Q9H270 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VPS11Q9H270 MIR3960-201ENST00000583311 91 ntBASIC23.57■■□□□ 1.36
VPS11Q9H270 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
VPS11Q9H270 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.56■■□□□ 1.36
VPS11Q9H270 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS11Q9H270 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS11Q9H270 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.56■■□□□ 1.36
VPS11Q9H270 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS11Q9H270 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS11Q9H270 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
VPS11Q9H270 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.55■■□□□ 1.36
VPS11Q9H270 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.55■■□□□ 1.36
VPS11Q9H270 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS11Q9H270 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.55■■□□□ 1.36
VPS11Q9H270 SMPD5-203ENST00000639008 1464 ntBASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms